Gene
RNA
| Item | Value |
|---|---|
| gene id | G888756 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 40779523 ~ 40779925 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1011115 | True | 403 | lncRNA | 0.42 | 1 | 40779523 | 40779925 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533881 | LOC106603270 | coding | downstream | 139862 | 40631165 ~ 40639661 (-) |
| LOC110533878 | LOC106603271 | coding | downstream | 232130 | 40496714 ~ 40547393 (-) |
| LOC110533872 | LOC106603282 | coding | downstream | 814712 | 39920761 ~ 39964811 (-) |
| LOC110533871 | LOC106603284 | coding | downstream | 860201 | 39904172 ~ 39919322 (-) |
| ksr1a | LOC106603285 | coding | downstream | 885795 | 39843126 ~ 39893728 (-) |
| LOC110533882 | LOC106603268 | coding | upstream | 60177 | 40840102 ~ 40853480 (-) |
| LOC110533890 | LOC106603263 | coding | upstream | 476899 | 41256824 ~ 41441750 (-) |
| LOC110533111 | LOC106603235 | coding | upstream | 695062 | 41474987 ~ 41475979 (-) |
| LOC110533892 | LOC106603262 | coding | upstream | 932386 | 41712311 ~ 41806880 (-) |
| LOC110533896 | LOC106603257 | coding | upstream | 1224901 | 42004826 ~ 42011726 (-) |
| G888752 | NA | non-coding | downstream | 3377 | 40775918 ~ 40776146 (-) |
| G888722 | NA | non-coding | downstream | 31950 | 40747364 ~ 40747573 (-) |
| G888700 | NA | non-coding | downstream | 47741 | 40730890 ~ 40731782 (-) |
| G888687 | NA | non-coding | downstream | 55813 | 40723429 ~ 40723710 (-) |
| G888612 | NA | non-coding | downstream | 124325 | 40654967 ~ 40655198 (-) |
| G888757 | NA | non-coding | upstream | 2492 | 40782417 ~ 40782714 (-) |
| G889211 | NA | non-coding | upstream | 10619 | 40790544 ~ 40790847 (-) |
| G889213 | NA | non-coding | upstream | 13756 | 40793681 ~ 40793927 (-) |
| G889214 | NA | non-coding | upstream | 14305 | 40794230 ~ 40794463 (-) |
| G889225 | NA | non-coding | upstream | 28815 | 40808740 ~ 40809013 (-) |
| G887329 | NA | other | downstream | 1561785 | 39217313 ~ 39217738 (-) |
| rpl36a | LOC106568029 | other | downstream | 1594029 | 39183698 ~ 39185578 (-) |
| G885767 | NA | other | downstream | 2538964 | 38238950 ~ 38240559 (-) |
| G890360 | LOC106603260 | other | upstream | 1202776 | 41982701 ~ 41984417 (-) |
| G890385 | LOC100136012 | other | upstream | 1207786 | 41987711 ~ 41989801 (-) |
| G890403 | NA | other | upstream | 1296816 | 42076741 ~ 42077947 (-) |
| LOC110533946 | mpp1 | other | upstream | 2279085 | 43057611 ~ 43070230 (-) |
| LOC110533954 | LOC106603192 | other | upstream | 2413757 | 43183815 ~ 43248006 (-) |
