Gene
RNA
| Item | Value |
|---|---|
| gene id | G890367 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 41945575 ~ 41945791 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1012926 | True | 217 | lncRNA | 0.37 | 1 | 41945575 | 41945791 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533892 | LOC106603262 | coding | downstream | 138695 | 41712311 ~ 41806880 (-) |
| LOC110533111 | LOC106603235 | coding | downstream | 469596 | 41474987 ~ 41475979 (-) |
| LOC110533890 | LOC106603263 | coding | downstream | 503825 | 41256824 ~ 41441750 (-) |
| LOC110533882 | LOC106603268 | coding | downstream | 1092095 | 40840102 ~ 40853480 (-) |
| LOC110533881 | LOC106603270 | coding | downstream | 1305914 | 40631165 ~ 40639661 (-) |
| LOC110533896 | LOC106603257 | coding | upstream | 59035 | 42004826 ~ 42011726 (-) |
| LOC110534921 | NA | coding | upstream | 399925 | 42345716 ~ 42353693 (-) |
| LOC118966777 | LOC106603212 | coding | upstream | 598820 | 42544611 ~ 42553273 (-) |
| LOC110533933 | NA | coding | upstream | 628982 | 42574773 ~ 42583308 (-) |
| LOC110534922 | LOC106603221 | coding | upstream | 643790 | 42589581 ~ 42593111 (-) |
| G890356 | NA | non-coding | downstream | 20327 | 41924937 ~ 41925248 (-) |
| G890337 | NA | non-coding | downstream | 45429 | 41899551 ~ 41900146 (-) |
| G889877 | NA | non-coding | downstream | 254130 | 41691227 ~ 41691445 (-) |
| G889874 | NA | non-coding | downstream | 259424 | 41685430 ~ 41686151 (-) |
| G890374 | LOC106603261 | non-coding | upstream | 16921 | 41962712 ~ 41966849 (-) |
| G890377 | LOC100380853 | non-coding | upstream | 25165 | 41970956 ~ 41971195 (-) |
| G890384 | NA | non-coding | upstream | 33294 | 41979085 ~ 41979290 (-) |
| G890385 | LOC100136012 | non-coding | upstream | 43155 | 41987711 ~ 41989801 (-) |
| LOC110533878 | LOC106603271 | other | downstream | 1398208 | 40496714 ~ 40547393 (-) |
| ksr1a | LOC106603285 | other | downstream | 2051872 | 39843126 ~ 39893728 (-) |
| G887329 | NA | other | downstream | 2727837 | 39217313 ~ 39217738 (-) |
| rpl36a | LOC106568029 | other | downstream | 2760081 | 39183698 ~ 39185578 (-) |
| G885767 | NA | other | downstream | 3705016 | 38238950 ~ 38240559 (-) |
| G890360 | LOC106603260 | other | upstream | 36910 | 41982701 ~ 41984417 (-) |
| G890403 | NA | other | upstream | 130950 | 42076741 ~ 42077947 (-) |
| LOC110533946 | mpp1 | other | upstream | 1113219 | 43057611 ~ 43070230 (-) |
| LOC110533954 | LOC106603192 | other | upstream | 1247891 | 43183815 ~ 43248006 (-) |
