G890141 (LOC106603257)


Basic Information

Item Value
gene id G890141
gene name LOC106603257
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 42006267 ~ 42006724 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1012586
TGTGGTCAGATTGTTTAGCTCCAAGTCTTTTGATGCACATATTGTACTATGCACCACTTAGTTAGGTCTTTACCTGGGTTCAGCCCAGCAAACTCCTTACATTCAATTCACACAGGGGAGGACAGTTGTCGAGTCATTTGGGTATGTTGTGTGGCATTGACTATGTAGGTGCTGTAGTGGCTGTGGGTCGGGTCCCTCTCACTTTCTTGCTTCTCTTGCTGACTGTGGTGAAGCGGAAGGGCTGCAGGTCGGGCTGCTCCCCGGGGGGCAGGCGCTTCATGAAGTGAACGTCCTGCTGGTTGGGCAGTGTCTGAGGGCCTCTCCTGGGGCGCCCCCTCTTGGTGAAGCCCACGTACCAGCCCGTATAGCGTGCTGACATCAGAGCTGTATAGTGGTTCTCCAACACCATCTCAACGAAGACACAGTCTGCACTGCGATTACTAGCCTTCtggaataca

Function

NR:

description
fibroblast growth factor 18-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1012586 True 458 lncRNA 0.53 1 42006267 42006724

Neighbor

gene id symbol gene type direction distance location
LOC110533895 LOC106603254 coding upstream 1477 41993741 ~ 42004790 (+)
LOC110533894 LOC106603260 coding upstream 20869 41979285 ~ 41985398 (+)
LOC110533893 LOC106603261 coding upstream 39467 41954207 ~ 41966800 (+)
LOC118966775 NA coding upstream 602125 41401490 ~ 41404142 (+)
LOC110533888 LOC106603264 coding upstream 766139 41029731 ~ 41240128 (+)
LOC110533897 LOC106603248 coding downstream 64239 42070963 ~ 42077962 (+)
LOC110533908 LOC106603248 coding downstream 72818 42079542 ~ 42085755 (+)
LOC110533112 NA coding downstream 105433 42112157 ~ 42115188 (+)
LOC110533898 LOC106603251 coding downstream 110509 42117233 ~ 42150557 (+)
LOC110533900 LOC106603249 coding downstream 158890 42165614 ~ 42306016 (+)
G890191 NA non-coding upstream 12764 41993201 ~ 41993503 (+)
G890188 NA non-coding upstream 14815 41991077 ~ 41991452 (+)
G890138 NA non-coding upstream 16359 41987359 ~ 41989908 (+)
G890186 NA non-coding upstream 27504 41978559 ~ 41978763 (+)
G890184 NA non-coding upstream 28590 41977419 ~ 41977677 (+)
G890194 NA non-coding downstream 1521 42008245 ~ 42008513 (+)
G890195 NA non-coding downstream 2715 42009439 ~ 42009660 (+)
G890199 NA non-coding downstream 6782 42013506 ~ 42013798 (+)
G890201 NA non-coding downstream 8483 42015207 ~ 42015407 (+)
G890203 NA non-coding downstream 9681 42016405 ~ 42024310 (+)
G889906 LOC106603262 other upstream 288975 41712327 ~ 41717292 (+)
LOC110533845 LOC106603305 other upstream 3194128 38755443 ~ 38815017 (+)
G883966 NA other upstream 5155114 36849646 ~ 36851153 (+)
LOC110533788 NA other upstream 5204682 36799376 ~ 36801589 (+)
G883473 om-i other upstream 5710720 36292302 ~ 36295572 (+)
G890228 NA other downstream 71491 42078215 ~ 42154093 (+)
G891133 NA other downstream 975958 42982682 ~ 43109676 (+)
G891188 NA other downstream 1089996 43096720 ~ 43097617 (+)
G891741 NA other downstream 1527592 43534316 ~ 43600230 (+)
G891740 LOC106603170 other downstream 1535742 43542466 ~ 43555517 (+)

Expression


Co-expression Network