G890195


Basic Information

Item Value
gene id G890195
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 42009439 ~ 42009660 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1012640
gagggaatagctgcactgtttgtattgttgtgttgtctTTGACTCAGAAGTGGgggctttctccttgaggaaactTGCTGGATAAATACTAAAATAGTCATACACTGTCGGTAAGACTGGAATATGAATGGATAGTTcaaagcttctgctcttttctataacctgtagggaacacaatatatggtatatacttggcatgtaggtgtCTCACTTGTGAGTGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1012640 True 222 lncRNA 0.41 1 42009439 42009660

Neighbor

gene id symbol gene type direction distance location
LOC110533895 LOC106603254 coding upstream 4649 41993741 ~ 42004790 (+)
LOC110533894 LOC106603260 coding upstream 24041 41979285 ~ 41985398 (+)
LOC110533893 LOC106603261 coding upstream 42639 41954207 ~ 41966800 (+)
LOC118966775 NA coding upstream 605297 41401490 ~ 41404142 (+)
LOC110533888 LOC106603264 coding upstream 769311 41029731 ~ 41240128 (+)
LOC110533897 LOC106603248 coding downstream 61303 42070963 ~ 42077962 (+)
LOC110533908 LOC106603248 coding downstream 69882 42079542 ~ 42085755 (+)
LOC110533112 NA coding downstream 102497 42112157 ~ 42115188 (+)
LOC110533898 LOC106603251 coding downstream 107573 42117233 ~ 42150557 (+)
LOC110533900 LOC106603249 coding downstream 155954 42165614 ~ 42306016 (+)
G890194 NA non-coding upstream 926 42008245 ~ 42008513 (+)
G890141 LOC106603257 non-coding upstream 2715 42006267 ~ 42006724 (+)
G890191 NA non-coding upstream 15936 41993201 ~ 41993503 (+)
G890188 NA non-coding upstream 17987 41991077 ~ 41991452 (+)
G890138 NA non-coding upstream 19531 41987359 ~ 41989908 (+)
G890199 NA non-coding downstream 3846 42013506 ~ 42013798 (+)
G890201 NA non-coding downstream 5547 42015207 ~ 42015407 (+)
G890203 NA non-coding downstream 6745 42016405 ~ 42024310 (+)
G890205 NA non-coding downstream 11098 42020758 ~ 42023968 (+)
G890228 NA non-coding downstream 81166 42078215 ~ 42154093 (+)
G889906 LOC106603262 other upstream 292147 41712327 ~ 41717292 (+)
LOC110533845 LOC106603305 other upstream 3197300 38755443 ~ 38815017 (+)
G883966 NA other upstream 5158286 36849646 ~ 36851153 (+)
LOC110533788 NA other upstream 5207854 36799376 ~ 36801589 (+)
G883473 om-i other upstream 5713892 36292302 ~ 36295572 (+)
G891133 NA other downstream 973022 42982682 ~ 43109676 (+)
G891188 NA other downstream 1087060 43096720 ~ 43097617 (+)
G891741 NA other downstream 1524656 43534316 ~ 43600230 (+)
G891740 LOC106603170 other downstream 1532806 43542466 ~ 43555517 (+)

Expression


Co-expression Network