Gene
RNA
| Item | Value |
|---|---|
| gene id | G890395 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 42015846 ~ 42017472 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106590899 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1012963 | True | 242 | lncRNA | 0.56 | 2 | 42015846 | 42017472 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533896 | LOC106603257 | coding | downstream | 4120 | 42004826 ~ 42011726 (-) |
| LOC110533892 | LOC106603262 | coding | downstream | 208966 | 41712311 ~ 41806880 (-) |
| LOC110533111 | LOC106603235 | coding | downstream | 539867 | 41474987 ~ 41475979 (-) |
| LOC110533890 | LOC106603263 | coding | downstream | 574096 | 41256824 ~ 41441750 (-) |
| LOC110533882 | LOC106603268 | coding | downstream | 1162366 | 40840102 ~ 40853480 (-) |
| LOC110534921 | NA | coding | upstream | 328244 | 42345716 ~ 42353693 (-) |
| LOC118966777 | LOC106603212 | coding | upstream | 527139 | 42544611 ~ 42553273 (-) |
| LOC110533933 | NA | coding | upstream | 557301 | 42574773 ~ 42583308 (-) |
| LOC110534922 | LOC106603221 | coding | upstream | 572109 | 42589581 ~ 42593111 (-) |
| LOC110533934 | LOC106603209 | coding | upstream | 591115 | 42608587 ~ 42616547 (-) |
| G890393 | NA | non-coding | downstream | 5390 | 42009979 ~ 42010456 (-) |
| G890390 | NA | non-coding | downstream | 7959 | 42007687 ~ 42007887 (-) |
| G890385 | LOC100136012 | non-coding | downstream | 26045 | 41987711 ~ 41989801 (-) |
| G890384 | NA | non-coding | downstream | 36556 | 41979085 ~ 41979290 (-) |
| G890397 | NA | non-coding | upstream | 120 | 42017592 ~ 42025713 (-) |
| G890399 | NA | non-coding | upstream | 35302 | 42052774 ~ 42062611 (-) |
| G890401 | NA | non-coding | upstream | 53114 | 42070586 ~ 42070838 (-) |
| G890405 | NA | non-coding | upstream | 70481 | 42087953 ~ 42089376 (-) |
| G890448 | NA | non-coding | upstream | 137067 | 42154539 ~ 42154843 (-) |
| G890360 | LOC106603260 | other | downstream | 31429 | 41982701 ~ 41984417 (-) |
| LOC110533878 | LOC106603271 | other | downstream | 1468479 | 40496714 ~ 40547393 (-) |
| ksr1a | LOC106603285 | other | downstream | 2122143 | 39843126 ~ 39893728 (-) |
| G887329 | NA | other | downstream | 2798108 | 39217313 ~ 39217738 (-) |
| G890403 | NA | other | upstream | 59269 | 42076741 ~ 42077947 (-) |
| LOC110533946 | mpp1 | other | upstream | 1041538 | 43057611 ~ 43070230 (-) |
| LOC110533954 | LOC106603192 | other | upstream | 1176210 | 43183815 ~ 43248006 (-) |
| LOC110533962 | LOC106603031 | other | upstream | 1666102 | 43681449 ~ 43686604 (-) |
| G892965 | NA | other | upstream | 1693013 | 43710485 ~ 43710969 (-) |
