G890247


Basic Information

Item Value
gene id G890247
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 42094999 ~ 42098654 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1012802
ATGCAAAGAGgatacgactgttcagaatggtgATATGATATGAGGTTATGATTTATAAGTTGGCTGTTTATAGATGTAAAGAccttttagagtttaattcgggagatggtaactatTTTAAGAACCGCTCTCGTGGGGCCCCAAATCCTAatgttaattgttacatgattcattaATTCAGGTGACAATTAAACATTAATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1012802 True 201 lncRNA 0.34 2 42094999 42098654

Neighbor

gene id symbol gene type direction distance location
LOC110533908 LOC106603248 coding upstream 9244 42079542 ~ 42085755 (+)
LOC110533897 LOC106603248 coding upstream 17037 42070963 ~ 42077962 (+)
LOC110533895 LOC106603254 coding upstream 90209 41993741 ~ 42004790 (+)
LOC110533894 LOC106603260 coding upstream 109601 41979285 ~ 41985398 (+)
LOC110533893 LOC106603261 coding upstream 128199 41954207 ~ 41966800 (+)
LOC110533112 NA coding downstream 13503 42112157 ~ 42115188 (+)
LOC110533898 LOC106603251 coding downstream 18579 42117233 ~ 42150557 (+)
LOC110533900 LOC106603249 coding downstream 66960 42165614 ~ 42306016 (+)
LOC118966776 LOC106603252 coding downstream 70000 42168654 ~ 42171430 (+)
LOC110510568 LOC106594182 coding downstream 81727 42180381 ~ 42183316 (+)
G890203 NA non-coding upstream 70689 42016405 ~ 42024310 (+)
G890205 NA non-coding upstream 71031 42020758 ~ 42023968 (+)
G890201 NA non-coding upstream 79592 42015207 ~ 42015407 (+)
G890199 NA non-coding upstream 81201 42013506 ~ 42013798 (+)
G890195 NA non-coding upstream 85339 42009439 ~ 42009660 (+)
G890318 NA non-coding downstream 235655 42334309 ~ 42334516 (+)
G890325 NA non-coding downstream 245249 42343903 ~ 42344109 (+)
G890560 NA non-coding downstream 260894 42359548 ~ 42359769 (+)
G890564 NA non-coding downstream 267160 42365814 ~ 42367662 (+)
G890583 NA non-coding downstream 293006 42391660 ~ 42392017 (+)
G889906 LOC106603262 other upstream 377707 41712327 ~ 41717292 (+)
LOC110533845 LOC106603305 other upstream 3282860 38755443 ~ 38815017 (+)
G883966 NA other upstream 5243846 36849646 ~ 36851153 (+)
LOC110533788 NA other upstream 5293414 36799376 ~ 36801589 (+)
G883473 om-i other upstream 5799452 36292302 ~ 36295572 (+)
G891133 NA other downstream 884028 42982682 ~ 43109676 (+)
G891188 NA other downstream 998066 43096720 ~ 43097617 (+)
G891741 NA other downstream 1435662 43534316 ~ 43600230 (+)
G891740 LOC106603170 other downstream 1443812 43542466 ~ 43555517 (+)
G891847 NA other downstream 1613891 43712545 ~ 43713082 (+)

Expression


Co-expression Network