G890325


Basic Information

Item Value
gene id G890325
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 42343903 ~ 42344109 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1012882
ATTTCTTTGGATCCCTAATTAGCTGCTGCGAGGCAGcggttactcttcctggggtccaaacaggaaacaacacaacaaataaaatacataacaTACATCAATATACATACATAGCACTACATTTCCATTAGAACTTAGCCATTCAGCAGACACTCCCATCTAGACAGACCCACGGCTAGTGCATTCAACTCAAGATAGCCAGGCGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1012882 True 207 lncRNA 0.43 1 42343903 42344109

Neighbor

gene id symbol gene type direction distance location
LOC110533900 LOC106603249 coding upstream 37887 42165614 ~ 42306016 (+)
LOC110533901 LOC106603244 coding upstream 64238 42276747 ~ 42279665 (+)
LOC110533909 LOC106594182 coding upstream 151238 42189982 ~ 42192665 (+)
LOC110510568 LOC106594182 coding upstream 160587 42180381 ~ 42183316 (+)
LOC118966776 LOC106603252 coding upstream 172473 42168654 ~ 42171430 (+)
LOC118966631 LOC106603216 coding downstream 52210 42396319 ~ 42407082 (+)
LOC110533929 LOC106603215 coding downstream 89771 42433880 ~ 42455077 (+)
LOC110533930 LOC106603214 coding downstream 151093 42495202 ~ 42531033 (+)
LOC110533931 LOC106603211 coding downstream 194307 42538416 ~ 42542857 (+)
LOC118937078 NA coding downstream 197806 42541915 ~ 42541985 (+)
G890318 NA non-coding upstream 9387 42334309 ~ 42334516 (+)
G890228 NA non-coding upstream 189810 42078215 ~ 42154093 (+)
G890249 NA non-coding upstream 242581 42096964 ~ 42101322 (+)
G890247 NA non-coding upstream 245249 42094999 ~ 42098654 (+)
G890203 NA non-coding upstream 319593 42016405 ~ 42024310 (+)
G890560 NA non-coding downstream 15439 42359548 ~ 42359769 (+)
G890564 NA non-coding downstream 21705 42365814 ~ 42367662 (+)
G890583 NA non-coding downstream 47551 42391660 ~ 42392017 (+)
G890593 NA non-coding downstream 67749 42411858 ~ 42412178 (+)
G890594 NA non-coding downstream 70383 42414492 ~ 42414974 (+)
G889906 LOC106603262 other upstream 626611 41712327 ~ 41717292 (+)
LOC110533845 LOC106603305 other upstream 3531764 38755443 ~ 38815017 (+)
G883966 NA other upstream 5492750 36849646 ~ 36851153 (+)
LOC110533788 NA other upstream 5542318 36799376 ~ 36801589 (+)
G891133 NA other downstream 638573 42982682 ~ 43109676 (+)
G891188 NA other downstream 752611 43096720 ~ 43097617 (+)
G891741 NA other downstream 1190207 43534316 ~ 43600230 (+)
G891740 LOC106603170 other downstream 1198357 43542466 ~ 43555517 (+)
G891847 NA other downstream 1368436 43712545 ~ 43713082 (+)

Expression


Co-expression Network