Gene
RNA
| Item | Value |
|---|---|
| gene id | G890542 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 42344055 ~ 42344343 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1013142 | True | 289 | lncRNA | 0.38 | 1 | 42344055 | 42344343 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533896 | LOC106603257 | coding | downstream | 332329 | 42004826 ~ 42011726 (-) |
| LOC110533892 | LOC106603262 | coding | downstream | 537175 | 41712311 ~ 41806880 (-) |
| LOC110533111 | LOC106603235 | coding | downstream | 868076 | 41474987 ~ 41475979 (-) |
| LOC110533890 | LOC106603263 | coding | downstream | 902305 | 41256824 ~ 41441750 (-) |
| LOC110533882 | LOC106603268 | coding | downstream | 1490575 | 40840102 ~ 40853480 (-) |
| LOC110534921 | NA | coding | upstream | 1373 | 42345716 ~ 42353693 (-) |
| LOC118966777 | LOC106603212 | coding | upstream | 200268 | 42544611 ~ 42553273 (-) |
| LOC110533933 | NA | coding | upstream | 230430 | 42574773 ~ 42583308 (-) |
| LOC110534922 | LOC106603221 | coding | upstream | 245238 | 42589581 ~ 42593111 (-) |
| LOC110533934 | LOC106603209 | coding | upstream | 264244 | 42608587 ~ 42616547 (-) |
| G890538 | NA | non-coding | downstream | 6835 | 42336952 ~ 42337220 (-) |
| G890526 | NA | non-coding | downstream | 28490 | 42315325 ~ 42315565 (-) |
| G890523 | NA | non-coding | downstream | 31043 | 42312805 ~ 42313012 (-) |
| G890455 | LOC106603244 | non-coding | downstream | 52903 | 42276782 ~ 42291152 (-) |
| G890450 | NA | non-coding | downstream | 185560 | 42158203 ~ 42158495 (-) |
| G890559 | NA | non-coding | upstream | 14105 | 42358448 ~ 42358688 (-) |
| G890570 | NA | non-coding | upstream | 20533 | 42364876 ~ 42375397 (-) |
| G890588 | NA | non-coding | upstream | 60904 | 42405247 ~ 42405467 (-) |
| G890595 | NA | non-coding | upstream | 70113 | 42414456 ~ 42414751 (-) |
| G890403 | NA | other | downstream | 266108 | 42076741 ~ 42077947 (-) |
| G890385 | LOC100136012 | other | downstream | 354254 | 41987711 ~ 41989801 (-) |
| G890360 | LOC106603260 | other | downstream | 359638 | 41982701 ~ 41984417 (-) |
| LOC110533878 | LOC106603271 | other | downstream | 1796688 | 40496714 ~ 40547393 (-) |
| ksr1a | LOC106603285 | other | downstream | 2450352 | 39843126 ~ 39893728 (-) |
| LOC110533946 | mpp1 | other | upstream | 714667 | 43057611 ~ 43070230 (-) |
| LOC110533954 | LOC106603192 | other | upstream | 849339 | 43183815 ~ 43248006 (-) |
| LOC110533962 | LOC106603031 | other | upstream | 1339231 | 43681449 ~ 43686604 (-) |
| G892965 | NA | other | upstream | 1366142 | 43710485 ~ 43710969 (-) |
| LOC110533117 | stx5 | other | upstream | 1855053 | 44199178 ~ 44209264 (-) |
