G890594


Basic Information

Item Value
gene id G890594
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 42414492 ~ 42414974 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1013213
gtccttttgtggtgggtgattctgtaacggttttctatatgagaaggagagtcggaccaaaatgcagcgtgtagattgcgatccatgttttaatgaacaaacgtaaaacacgaatcaatgcaaacactacaaaataaagaacgtgatgaacgtaacgaaaacctaaaacagcctatctggtgaaaaacacatagacaggaacaatcacccacaaacacacagtgaaacccaggctacctaaatatggttcccaatcagagacaatgactaacacctgcctctgattgagaaccatatcaggccagacatagaaatagacaaacaagacatccaacatagaatgcccacccagttcacgtcctgaccaacactaaaacaagaaaaacacacacaaacgatggtcagaacgtgacactccaacctaaatgtgtgtaaacctccgacttcaactgtgttgtTTCAGCAATAGGTTctgatcaatgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1013213 True 483 lncRNA 0.41 1 42414492 42414974

Neighbor

gene id symbol gene type direction distance location
LOC118966631 LOC106603216 coding upstream 7410 42396319 ~ 42407082 (+)
LOC110533901 LOC106603244 coding upstream 134827 42276747 ~ 42279665 (+)
LOC110533909 LOC106594182 coding upstream 221827 42189982 ~ 42192665 (+)
LOC110510568 LOC106594182 coding upstream 231176 42180381 ~ 42183316 (+)
LOC118966776 LOC106603252 coding upstream 243062 42168654 ~ 42171430 (+)
LOC110533929 LOC106603215 coding downstream 18906 42433880 ~ 42455077 (+)
LOC110533930 LOC106603214 coding downstream 80228 42495202 ~ 42531033 (+)
LOC110533931 LOC106603211 coding downstream 123442 42538416 ~ 42542857 (+)
LOC118937078 NA coding downstream 126941 42541915 ~ 42541985 (+)
LOC118966778 LOC106563172 coding downstream 186438 42601412 ~ 42603732 (+)
G890593 NA non-coding upstream 2314 42411858 ~ 42412178 (+)
G890583 NA non-coding upstream 22475 42391660 ~ 42392017 (+)
G890564 NA non-coding upstream 46830 42365814 ~ 42367662 (+)
G890560 NA non-coding upstream 54723 42359548 ~ 42359769 (+)
G890325 NA non-coding upstream 70383 42343903 ~ 42344109 (+)
G890597 NA non-coding downstream 2673 42417647 ~ 42417899 (+)
G890654 NA non-coding downstream 49592 42464566 ~ 42465549 (+)
G890662 LOC107705928 non-coding downstream 55618 42470592 ~ 42471000 (+)
G890714 NA non-coding downstream 160325 42575299 ~ 42575505 (+)
G890715 NA non-coding downstream 160681 42575655 ~ 42575931 (+)
G890228 NA other upstream 260714 42078215 ~ 42154093 (+)
G889906 LOC106603262 other upstream 697200 41712327 ~ 41717292 (+)
LOC110533845 LOC106603305 other upstream 3602353 38755443 ~ 38815017 (+)
G883966 NA other upstream 5563339 36849646 ~ 36851153 (+)
LOC110533788 NA other upstream 5612907 36799376 ~ 36801589 (+)
G891133 NA other downstream 567708 42982682 ~ 43109676 (+)
G891188 NA other downstream 681746 43096720 ~ 43097617 (+)
G891741 NA other downstream 1119342 43534316 ~ 43600230 (+)
G891740 LOC106603170 other downstream 1127492 43542466 ~ 43555517 (+)
G891847 NA other downstream 1297571 43712545 ~ 43713082 (+)

Expression


Co-expression Network