G890716


Basic Information

Item Value
gene id G890716
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 42575989 ~ 42576305 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1013344
AGCACATACATACCAGGGCATGCTGTAGGCCTCAATACGCAGGTGGGCATCTCCTTCGTTCCTGATCACATACTCCACCCAGAAGGCATCACGCTCCAGGGCGTGGAGAAGCTGGTCCCGGTTTAGGGTGCAGAGTCTCTCCATGCTGCGCTGGTAAGAGGGGTTCTTCAGGATGTCTTGCAGCGCCTCCAGGAACTCCCATTCAGTGAGCATGGCTGCATCCAGCAACCGGGCCTCCCTGCTGGCTTTGCAAATGCACCAGGTTGTCCTGCTGGTCAAACCGCAGAGGCAGGCCCAGCACAGGGACACCTTGGTAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1013344 True 317 lncRNA 0.58 1 42575989 42576305

Neighbor

gene id symbol gene type direction distance location
LOC110533931 LOC106603211 coding upstream 33132 42538416 ~ 42542857 (+)
LOC118937078 NA coding upstream 34004 42541915 ~ 42541985 (+)
LOC110533930 LOC106603214 coding upstream 44956 42495202 ~ 42531033 (+)
LOC110533929 LOC106603215 coding upstream 120912 42433880 ~ 42455077 (+)
LOC118966631 LOC106603216 coding upstream 168907 42396319 ~ 42407082 (+)
LOC118966778 LOC106563172 coding downstream 25107 42601412 ~ 42603732 (+)
LOC110533114 LOC106603207 coding downstream 163860 42740165 ~ 42815146 (+)
LOC110533937 LOC106603205 coding downstream 290463 42866768 ~ 42887262 (+)
LOC110533939 LOC106603204 coding downstream 311510 42887815 ~ 42923475 (+)
LOC118966779 NA coding downstream 375333 42951638 ~ 42956223 (+)
G890715 NA non-coding upstream 58 42575655 ~ 42575931 (+)
G890714 NA non-coding upstream 484 42575299 ~ 42575505 (+)
G890662 LOC107705928 non-coding upstream 104989 42470592 ~ 42471000 (+)
G890654 NA non-coding upstream 110440 42464566 ~ 42465549 (+)
G890597 NA non-coding upstream 158090 42417647 ~ 42417899 (+)
G890733 NA non-coding downstream 29776 42606081 ~ 42606395 (+)
G890734 NA non-coding downstream 31694 42607999 ~ 42608350 (+)
G890747 NA non-coding downstream 45134 42621439 ~ 42621668 (+)
G890751 NA non-coding downstream 48342 42624647 ~ 42624856 (+)
G890756 NA non-coding downstream 53716 42630021 ~ 42630246 (+)
G890228 NA other upstream 422211 42078215 ~ 42154093 (+)
G889906 LOC106603262 other upstream 858697 41712327 ~ 41717292 (+)
LOC110533845 LOC106603305 other upstream 3763850 38755443 ~ 38815017 (+)
G883966 NA other upstream 5724836 36849646 ~ 36851153 (+)
LOC110533788 NA other upstream 5774404 36799376 ~ 36801589 (+)
G891133 NA other downstream 406377 42982682 ~ 43109676 (+)
G891188 NA other downstream 520415 43096720 ~ 43097617 (+)
G891741 NA other downstream 958011 43534316 ~ 43600230 (+)
G891740 LOC106603170 other downstream 966161 43542466 ~ 43555517 (+)
G891847 NA other downstream 1136240 43712545 ~ 43713082 (+)

Expression


Co-expression Network