Gene
RNA
| Item | Value |
|---|---|
| gene id | G890827 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 42582116 ~ 42582489 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1013467 | True | 374 | lncRNA | 0.37 | 1 | 42582116 | 42582489 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118966777 | LOC106603212 | coding | downstream | 28843 | 42544611 ~ 42553273 (-) |
| LOC110534921 | NA | coding | downstream | 228423 | 42345716 ~ 42353693 (-) |
| LOC110533896 | LOC106603257 | coding | downstream | 570390 | 42004826 ~ 42011726 (-) |
| LOC110533892 | LOC106603262 | coding | downstream | 775236 | 41712311 ~ 41806880 (-) |
| LOC110533111 | LOC106603235 | coding | downstream | 1106137 | 41474987 ~ 41475979 (-) |
| LOC110534922 | LOC106603221 | coding | upstream | 7092 | 42589581 ~ 42593111 (-) |
| LOC110533934 | LOC106603209 | coding | upstream | 26098 | 42608587 ~ 42616547 (-) |
| LOC110533935 | LOC106603208 | coding | upstream | 67796 | 42650285 ~ 42707718 (-) |
| LOC110533936 | LOC106603206 | coding | upstream | 230098 | 42812587 ~ 42828697 (-) |
| LOC110533115 | LOC105024620 | coding | upstream | 270909 | 42853398 ~ 42859770 (-) |
| G890798 | NA | non-coding | downstream | 37820 | 42544011 ~ 42544296 (-) |
| G890797 | NA | non-coding | downstream | 38235 | 42543462 ~ 42543881 (-) |
| G890793 | NA | non-coding | downstream | 50671 | 42531229 ~ 42531445 (-) |
| G890762 | NA | non-coding | downstream | 51091 | 42522665 ~ 42531025 (-) |
| G890768 | NA | non-coding | downstream | 95255 | 42486516 ~ 42486861 (-) |
| G890843 | NA | non-coding | upstream | 42206 | 42624695 ~ 42624908 (-) |
| G890846 | NA | non-coding | upstream | 45196 | 42627685 ~ 42627899 (-) |
| G890815 | NA | non-coding | upstream | 47314 | 42629803 ~ 42630099 (-) |
| G890852 | NA | non-coding | upstream | 56219 | 42638708 ~ 42638910 (-) |
| G890899 | NA | non-coding | upstream | 62958 | 42645447 ~ 42649991 (-) |
| G890403 | NA | other | downstream | 504169 | 42076741 ~ 42077947 (-) |
| G890385 | LOC100136012 | other | downstream | 592315 | 41987711 ~ 41989801 (-) |
| G890360 | LOC106603260 | other | downstream | 597699 | 41982701 ~ 41984417 (-) |
| LOC110533878 | LOC106603271 | other | downstream | 2034749 | 40496714 ~ 40547393 (-) |
| ksr1a | LOC106603285 | other | downstream | 2688413 | 39843126 ~ 39893728 (-) |
| LOC110533946 | mpp1 | other | upstream | 476521 | 43057611 ~ 43070230 (-) |
| LOC110533954 | LOC106603192 | other | upstream | 611193 | 43183815 ~ 43248006 (-) |
| LOC110533962 | LOC106603031 | other | upstream | 1101085 | 43681449 ~ 43686604 (-) |
| G892965 | NA | other | upstream | 1127996 | 43710485 ~ 43710969 (-) |
| LOC110533117 | stx5 | other | upstream | 1616907 | 44199178 ~ 44209264 (-) |
