G890761


Basic Information

Item Value
gene id G890761
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 42632753 ~ 42634163 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1013392
ttggtgagcgtacattttcctttattaaTGTAAATGTcagcaacaaaacaagaaacaaagaaacgaccgtgaagcttacgagggctatagtgccactaacaaagataacttcccacaatgacaaaaGGGAACAAGGCTGCCTAAgtgtgattcccaatcagagacaacaatagacagctgtccctgattgagaaccatacccggccaaaacatagaaatacaaaaacatagaaaacagaacatagaatgcccacccaaatcacaccctgaccaaaccaaatagaaacataaaaaggctctctaaggtcagggcgtgacatatgaTCATGTTTTTTggttctagcagccgtgtttatttattgctttatccgagtagccggaaagtagagcattgcagtagtcttaacctagaagtgacaaaagcatgtgGTCGTCGTAAGAACGGTTGTCGTAAGaacgggaccaaggcgcagcggatgttgagtgAAACAAAAATATACCAATAAACGAACAACTAAACGTGACTACGTGATGcaaatgcacaaacacaaaacaatatcccacaaacacaggtgggagaaATATCTACTTAAAtttgatccccaattagagacaacgattaccagctgcctctaattgggaatcatacaaaacaccaacatagaaaatataaactataacacaacatagaaattataaactagaataccccctagtcacgccctgatctactacaccatagagaaacaagggctctctatggtcagagcGAGACAGTACCCCCTCTCTTTGTTTcgtgggacctagaactagcatctctgttttgtctgagtttaaaagtagaacatttgttgtccgcatagcagtgaaagttaacattatgtttctgaatgacatcaccaagaggtaaaaatatatagtgaaaacaatagtggtcctaaaacggagccttgatgaacaccgacatttacagttgatttgtcagaggacaaaccatccacagagacaaacatatctttccgacagataagatctaaaccaggccagaacttgtctgtgtaaaccaatttgggtttccaatctctccaaaagaatgtggtgaatgatagtatcaaaagcagcactaaggtctaggagcatgaggacagatgcagagcctcggtctgatgccattaaaatgtaatttgccACCcccacaagtgcagtctcagtgctatgatggggtctaaaaccagactgaagcgttttgtATACGTTGTATGTCTTCAgggaggcagtgagttgctgcacaaAATCTTTTCCAAacattgagaggaatgggagattcgatataggccgatagtttttaatattttctggttcaaggtttggctttttcaagagaggctttattacttccacttttagtgag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1013392 True 1411 lncRNA 0.40 1 42632753 42634163

Neighbor

gene id symbol gene type direction distance location
LOC118966778 LOC106563172 coding upstream 29021 42601412 ~ 42603732 (+)
LOC110533931 LOC106603211 coding upstream 89896 42538416 ~ 42542857 (+)
LOC118937078 NA coding upstream 90768 42541915 ~ 42541985 (+)
LOC110533930 LOC106603214 coding upstream 101720 42495202 ~ 42531033 (+)
LOC110533929 LOC106603215 coding upstream 177676 42433880 ~ 42455077 (+)
LOC110533114 LOC106603207 coding downstream 106002 42740165 ~ 42815146 (+)
LOC110533937 LOC106603205 coding downstream 232605 42866768 ~ 42887262 (+)
LOC110533939 LOC106603204 coding downstream 253652 42887815 ~ 42923475 (+)
LOC118966779 NA coding downstream 317475 42951638 ~ 42956223 (+)
kdm6bb LOC106603203 coding downstream 351549 42985712 ~ 43008622 (+)
G890760 NA non-coding upstream 370 42632036 ~ 42632383 (+)
G890759 NA non-coding upstream 844 42631582 ~ 42631909 (+)
G890758 NA non-coding upstream 1644 42630908 ~ 42631109 (+)
G890757 NA non-coding upstream 2121 42630380 ~ 42630632 (+)
G890756 NA non-coding upstream 2507 42630021 ~ 42630246 (+)
G890857 NA non-coding downstream 6799 42640962 ~ 42641266 (+)
G890866 NA non-coding downstream 11274 42645437 ~ 42646377 (+)
G890865 NA non-coding downstream 14348 42648511 ~ 42649794 (+)
G890895 NA non-coding downstream 66087 42700250 ~ 42705092 (+)
G890898 NA non-coding downstream 72605 42706768 ~ 42707609 (+)
G890228 NA other upstream 478975 42078215 ~ 42154093 (+)
G889906 LOC106603262 other upstream 915461 41712327 ~ 41717292 (+)
LOC110533845 LOC106603305 other upstream 3820614 38755443 ~ 38815017 (+)
G883966 NA other upstream 5781600 36849646 ~ 36851153 (+)
LOC110533788 NA other upstream 5831168 36799376 ~ 36801589 (+)
G891133 NA other downstream 348519 42982682 ~ 43109676 (+)
G891188 NA other downstream 462557 43096720 ~ 43097617 (+)
G891741 NA other downstream 900153 43534316 ~ 43600230 (+)
G891740 LOC106603170 other downstream 908303 43542466 ~ 43555517 (+)
G891847 NA other downstream 1078382 43712545 ~ 43713082 (+)

Expression


Co-expression Network