Gene
RNA
| Item | Value |
|---|---|
| gene id | G890905 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 42660302 ~ 42660501 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| piggyBac transposable element-derived protein 4-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1013547 | True | 200 | lncRNA | 0.48 | 1 | 42660302 | 42660501 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533934 | LOC106603209 | coding | downstream | 43755 | 42608587 ~ 42616547 (-) |
| LOC110534922 | LOC106603221 | coding | downstream | 67191 | 42589581 ~ 42593111 (-) |
| LOC110533933 | NA | coding | downstream | 76994 | 42574773 ~ 42583308 (-) |
| LOC118966777 | LOC106603212 | coding | downstream | 107029 | 42544611 ~ 42553273 (-) |
| LOC110534921 | NA | coding | downstream | 306609 | 42345716 ~ 42353693 (-) |
| LOC110533936 | LOC106603206 | coding | upstream | 152086 | 42812587 ~ 42828697 (-) |
| LOC110533115 | LOC105024620 | coding | upstream | 192897 | 42853398 ~ 42859770 (-) |
| LOC110533116 | LOC106603218 | coding | upstream | 202714 | 42863215 ~ 42866115 (-) |
| LOC110533943 | LOC106603199 | coding | upstream | 373495 | 43033996 ~ 43038340 (-) |
| LOC110533944 | LOC106603198 | coding | upstream | 387154 | 43047655 ~ 43056228 (-) |
| G890903 | NA | non-coding | downstream | 1307 | 42658791 ~ 42658995 (-) |
| G890900 | NA | non-coding | downstream | 4881 | 42655197 ~ 42655421 (-) |
| G890899 | NA | non-coding | downstream | 10311 | 42645447 ~ 42649991 (-) |
| G890852 | NA | non-coding | downstream | 21392 | 42638708 ~ 42638910 (-) |
| G890815 | NA | non-coding | downstream | 30203 | 42629803 ~ 42630099 (-) |
| G890906 | NA | non-coding | upstream | 333 | 42660834 ~ 42661172 (-) |
| G891338 | NA | non-coding | upstream | 191577 | 42852078 ~ 42852558 (-) |
| G891339 | NA | non-coding | upstream | 192301 | 42852802 ~ 42853366 (-) |
| G891343 | NA | non-coding | upstream | 206298 | 42866799 ~ 42869388 (-) |
| G891356 | NA | non-coding | upstream | 222752 | 42883253 ~ 42886001 (-) |
| G890403 | NA | other | downstream | 582355 | 42076741 ~ 42077947 (-) |
| G890385 | LOC100136012 | other | downstream | 670501 | 41987711 ~ 41989801 (-) |
| G890360 | LOC106603260 | other | downstream | 675885 | 41982701 ~ 41984417 (-) |
| LOC110533878 | LOC106603271 | other | downstream | 2112935 | 40496714 ~ 40547393 (-) |
| ksr1a | LOC106603285 | other | downstream | 2766599 | 39843126 ~ 39893728 (-) |
| LOC110533946 | mpp1 | other | upstream | 398509 | 43057611 ~ 43070230 (-) |
| LOC110533954 | LOC106603192 | other | upstream | 533181 | 43183815 ~ 43248006 (-) |
| LOC110533962 | LOC106603031 | other | upstream | 1023073 | 43681449 ~ 43686604 (-) |
| G892965 | NA | other | upstream | 1049984 | 43710485 ~ 43710969 (-) |
| LOC110533117 | stx5 | other | upstream | 1538895 | 44199178 ~ 44209264 (-) |
