G891093


Basic Information

Item Value
gene id G891093
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 42926681 ~ 42926884 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1013761
gcattttattgcatgacatattactccagtgctagcctccctacactggctacctgttaaggcaagggctgatttcaaggttttactgctaacctacaaagcattacatgggcttgctcctacctatctctctgatttggtcctgcagtacatacctacacgtacgctacggtcacaagatgcaggcctcctaattgtccctag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1013761 True 204 lncRNA 0.47 1 42926681 42926884

Neighbor

gene id symbol gene type direction distance location
LOC110533939 LOC106603204 coding upstream 3206 42887815 ~ 42923475 (+)
LOC110533937 LOC106603205 coding upstream 41031 42866768 ~ 42887262 (+)
LOC110533114 LOC106603207 coding upstream 115635 42740165 ~ 42815146 (+)
LOC118966778 LOC106563172 coding upstream 322949 42601412 ~ 42603732 (+)
LOC110533931 LOC106603211 coding upstream 383824 42538416 ~ 42542857 (+)
LOC118966779 NA coding downstream 24754 42951638 ~ 42956223 (+)
kdm6bb LOC106603203 coding downstream 58828 42985712 ~ 43008622 (+)
tmem88a LOC106603200 coding downstream 83516 43010400 ~ 43013688 (+)
LOC110533942 NA coding downstream 87824 43014708 ~ 43028438 (+)
LOC118937073 NA coding downstream 158015 43084899 ~ 43085032 (+)
G891055 NA non-coding upstream 73932 42852207 ~ 42852749 (+)
G890950 NA non-coding upstream 204243 42720439 ~ 42722438 (+)
G890898 NA non-coding upstream 219072 42706768 ~ 42707609 (+)
G891142 NA non-coding downstream 66158 42993042 ~ 42993613 (+)
G891157 LOC106603199 non-coding downstream 107113 43033997 ~ 43036826 (+)
G891171 NA non-coding downstream 136210 43063094 ~ 43070131 (+)
G891207 NA non-coding downstream 220054 43146938 ~ 43147169 (+)
G890228 NA other upstream 772903 42078215 ~ 42154093 (+)
G889906 LOC106603262 other upstream 1209389 41712327 ~ 41717292 (+)
LOC110533845 LOC106603305 other upstream 4114542 38755443 ~ 38815017 (+)
G883966 NA other upstream 6075528 36849646 ~ 36851153 (+)
LOC110533788 NA other upstream 6125096 36799376 ~ 36801589 (+)
G891133 NA other downstream 55798 42982682 ~ 43109676 (+)
G891188 NA other downstream 169836 43096720 ~ 43097617 (+)
G891741 NA other downstream 607432 43534316 ~ 43600230 (+)
G891740 LOC106603170 other downstream 615582 43542466 ~ 43555517 (+)
G891847 NA other downstream 785661 43712545 ~ 43713082 (+)

Expression


Co-expression Network