Gene
RNA
| Item | Value |
|---|---|
| gene id | G891393 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 42942981 ~ 42943265 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1014111 | True | 285 | lncRNA | 0.38 | 1 | 42942981 | 42943265 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533116 | LOC106603218 | coding | downstream | 76866 | 42863215 ~ 42866115 (-) |
| LOC110533115 | LOC105024620 | coding | downstream | 83211 | 42853398 ~ 42859770 (-) |
| LOC110533936 | LOC106603206 | coding | downstream | 114284 | 42812587 ~ 42828697 (-) |
| LOC110533935 | LOC106603208 | coding | downstream | 235263 | 42650285 ~ 42707718 (-) |
| LOC110533934 | LOC106603209 | coding | downstream | 326434 | 42608587 ~ 42616547 (-) |
| LOC110533943 | LOC106603199 | coding | upstream | 90731 | 43033996 ~ 43038340 (-) |
| LOC110533944 | LOC106603198 | coding | upstream | 104390 | 43047655 ~ 43056228 (-) |
| LOC110533946 | mpp1 | coding | upstream | 114346 | 43057611 ~ 43070230 (-) |
| LOC110533948 | LOC106603196 | coding | upstream | 145021 | 43088286 ~ 43095752 (-) |
| LOC110533951 | mpp1 | coding | upstream | 175303 | 43118568 ~ 43140706 (-) |
| G891387 | NA | non-coding | downstream | 12776 | 42929939 ~ 42930205 (-) |
| G891384 | NA | non-coding | downstream | 15272 | 42927500 ~ 42927709 (-) |
| G891356 | NA | non-coding | downstream | 56980 | 42883253 ~ 42886001 (-) |
| G891343 | NA | non-coding | downstream | 73593 | 42866799 ~ 42869388 (-) |
| G891339 | NA | non-coding | downstream | 89615 | 42852802 ~ 42853366 (-) |
| G891424 | NA | non-coding | upstream | 39367 | 42982632 ~ 43109649 (-) |
| G891376 | LOC106603203 | non-coding | upstream | 60972 | 43004237 ~ 43008599 (-) |
| G891440 | NA | non-coding | upstream | 71436 | 43014701 ~ 43020440 (-) |
| G891469 | NA | non-coding | upstream | 132263 | 43075528 ~ 43075844 (-) |
| G891483 | LOC106603194 | non-coding | upstream | 161289 | 43104554 ~ 43105552 (-) |
| G890403 | NA | other | downstream | 865034 | 42076741 ~ 42077947 (-) |
| G890385 | LOC100136012 | other | downstream | 953180 | 41987711 ~ 41989801 (-) |
| G890360 | LOC106603260 | other | downstream | 958564 | 41982701 ~ 41984417 (-) |
| LOC110533878 | LOC106603271 | other | downstream | 2395614 | 40496714 ~ 40547393 (-) |
| ksr1a | LOC106603285 | other | downstream | 3049278 | 39843126 ~ 39893728 (-) |
| LOC110533954 | LOC106603192 | other | upstream | 250417 | 43183815 ~ 43248006 (-) |
| LOC110533962 | LOC106603031 | other | upstream | 740309 | 43681449 ~ 43686604 (-) |
| G892965 | NA | other | upstream | 767220 | 43710485 ~ 43710969 (-) |
| LOC110533117 | stx5 | other | upstream | 1256131 | 44199178 ~ 44209264 (-) |
