G891424


Basic Information

Item Value
gene id G891424
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 42982632 ~ 43109649 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1014143
acatacacatggttagcagatgttaatgcgagtgtagcgaaatgcttgtgcttctagttccgacaatgcagtaataaccaacgagtcatctaacctaacaatttcacaacaactaccttatacacacaagtgtaaaggatgaagtatatatgaatatatgaatgagtgatggtacagaacagcataggcaagatacagtagatggtatagagtacagtatatacatatgagatgagtaatgtagggtgtgtaaacatattaagtggcattgtttaaagtggctagtgatatataaaatgtattaatttttccattattaaagtggctggagttgagtcagtatgttggcagcagccactcaatgttagtggtggctgtttaacagtctgatggccttgagatagaagctgtttttcagtctctcggtccctgctttgatgcacctgtactgacctcgccttctggatgatagcggagtgaacaggcagtggctcgggtggttgttgtccttgatgatctttatggccttcctgtgacatcgggtggtgtaggtgtcctgtagggcaggtagtttgcccccgtgatgcgttgtgcagacctcaataccctctggagagccttacggttgtgggcggagcagttgccgtaccagtcggtgatacagcccaacaggatgctctcgattgtgcatctgtaaaagagtgcttttggtgacaagccaaatttcttcagcctcctgaggttgaagaggcgctgctgcgccttcttcgccacgctgtctgtgtgggtggaccaattcagtttgtccgtggtgtgtacgccgaggaacttaaaacttactaccctctccattacTGAGAGGGTAGGGatagggctcagaatgcacccttgtggggccccagtgttgaggatcagcggggtggagacgTTGTTGACCATTTCAATTTATCCGTGATGTGTACgacgaggaacttaaaactttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1014143 True 983 lncRNA 0.46 2 42982632 43109649

Neighbor

gene id symbol gene type direction distance location
LOC110533116 LOC106603218 coding downstream 116517 42863215 ~ 42866115 (-)
LOC110533115 LOC105024620 coding downstream 122862 42853398 ~ 42859770 (-)
LOC110533936 LOC106603206 coding downstream 153935 42812587 ~ 42828697 (-)
LOC110533935 LOC106603208 coding downstream 274914 42650285 ~ 42707718 (-)
LOC110533934 LOC106603209 coding downstream 366085 42608587 ~ 42616547 (-)
LOC110533951 mpp1 coding upstream 8919 43118568 ~ 43140706 (-)
LOC110533953 LOC106603193 coding upstream 60076 43169725 ~ 43174015 (-)
LOC110533954 LOC106603192 coding upstream 74166 43183815 ~ 43248006 (-)
LOC110533956 LOC106603169 coding upstream 424631 43534280 ~ 43542281 (-)
LOC110533957 LOC106603170 coding upstream 433512 43543161 ~ 43555601 (-)
G891393 NA non-coding downstream 39367 42942981 ~ 42943265 (-)
G891387 NA non-coding downstream 52427 42929939 ~ 42930205 (-)
G891384 NA non-coding downstream 54923 42927500 ~ 42927709 (-)
G891356 NA non-coding downstream 96631 42883253 ~ 42886001 (-)
G891343 NA non-coding downstream 113244 42866799 ~ 42869388 (-)
G891488 NA non-coding upstream 32189 43141838 ~ 43142068 (-)
G891490 NA non-coding upstream 34274 43143923 ~ 43144798 (-)
G891491 NA non-coding upstream 35633 43145282 ~ 43145833 (-)
G891495 NA non-coding upstream 41050 43150699 ~ 43151039 (-)
G891499 NA non-coding upstream 45069 43154718 ~ 43154922 (-)
G890403 NA other downstream 904685 42076741 ~ 42077947 (-)
G890385 LOC100136012 other downstream 992831 41987711 ~ 41989801 (-)
G890360 LOC106603260 other downstream 998215 41982701 ~ 41984417 (-)
LOC110533878 LOC106603271 other downstream 2435265 40496714 ~ 40547393 (-)
ksr1a LOC106603285 other downstream 3088929 39843126 ~ 39893728 (-)
LOC110533962 LOC106603031 other upstream 573925 43681449 ~ 43686604 (-)
G892965 NA other upstream 600836 43710485 ~ 43710969 (-)
LOC110533117 stx5 other upstream 1089747 44199178 ~ 44209264 (-)
LOC110534000 frmd8 other upstream 1196570 44303605 ~ 44308978 (-)

Expression


Co-expression Network