Gene
RNA
| Item | Value |
|---|---|
| gene id | G891483 |
| gene name | LOC106603194 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 43104554 ~ 43105552 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| trimethyllysine dioxygenase, mitochondrial-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1014205 | True | 567 | lncRNA | 0.48 | 2 | 43104554 | 43105552 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533948 | LOC106603196 | coding | downstream | 8802 | 43088286 ~ 43095752 (-) |
| LOC110533946 | mpp1 | coding | downstream | 34324 | 43057611 ~ 43070230 (-) |
| LOC110533944 | LOC106603198 | coding | downstream | 48326 | 43047655 ~ 43056228 (-) |
| LOC110533943 | LOC106603199 | coding | downstream | 66214 | 43033996 ~ 43038340 (-) |
| LOC110533116 | LOC106603218 | coding | downstream | 238439 | 42863215 ~ 42866115 (-) |
| LOC110533951 | mpp1 | coding | upstream | 13016 | 43118568 ~ 43140706 (-) |
| LOC110533953 | LOC106603193 | coding | upstream | 64173 | 43169725 ~ 43174015 (-) |
| LOC110533954 | LOC106603192 | coding | upstream | 78263 | 43183815 ~ 43248006 (-) |
| LOC110533956 | LOC106603169 | coding | upstream | 428728 | 43534280 ~ 43542281 (-) |
| LOC110533957 | LOC106603170 | coding | upstream | 437609 | 43543161 ~ 43555601 (-) |
| G891469 | NA | non-coding | downstream | 28710 | 43075528 ~ 43075844 (-) |
| G891440 | NA | non-coding | downstream | 84114 | 43014701 ~ 43020440 (-) |
| G891376 | LOC106603203 | non-coding | downstream | 95955 | 43004237 ~ 43008599 (-) |
| G891393 | NA | non-coding | downstream | 161289 | 42942981 ~ 42943265 (-) |
| G891387 | NA | non-coding | downstream | 174349 | 42929939 ~ 42930205 (-) |
| G891425 | NA | non-coding | upstream | 2494 | 43108046 ~ 43111579 (-) |
| G891488 | NA | non-coding | upstream | 36286 | 43141838 ~ 43142068 (-) |
| G891490 | NA | non-coding | upstream | 38371 | 43143923 ~ 43144798 (-) |
| G891491 | NA | non-coding | upstream | 39730 | 43145282 ~ 43145833 (-) |
| G891495 | NA | non-coding | upstream | 45147 | 43150699 ~ 43151039 (-) |
| G890403 | NA | other | downstream | 1026607 | 42076741 ~ 42077947 (-) |
| G890385 | LOC100136012 | other | downstream | 1114753 | 41987711 ~ 41989801 (-) |
| G890360 | LOC106603260 | other | downstream | 1120137 | 41982701 ~ 41984417 (-) |
| LOC110533878 | LOC106603271 | other | downstream | 2557187 | 40496714 ~ 40547393 (-) |
| LOC110533962 | LOC106603031 | other | upstream | 578022 | 43681449 ~ 43686604 (-) |
| G892965 | NA | other | upstream | 604933 | 43710485 ~ 43710969 (-) |
| LOC110533117 | stx5 | other | upstream | 1093844 | 44199178 ~ 44209264 (-) |
| LOC110534000 | frmd8 | other | upstream | 1200667 | 44303605 ~ 44308978 (-) |
