G891741


Basic Information

Item Value
gene id G891741
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 43534316 ~ 43600230 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1014469
TCAAAACAACAGAACCTGTACAAGCATGACAAGGCACACAATGACTAAGCAATGGCTGCTAAATAAGCTACGATGGTTACACCATACATTCACATGTAGACATCGTTTAGCTAAAAACGCTGTATTTTCCAAACGGATATAAAGCAATATCCCATCTCCCCCATCTCGTATGAAATAGTTCATTACAAATTGTCCCTCCGCCCTTCTATGAGAATCAACATTTGAGGTTTTCAGACAAAATGCCTCACTCAGGACTCAAAACTCTGCATCTGCAGGAGAGGACAAAGTTAATGGTTTGGAACATTTCCATGAAATACCTTATGAAAACATTCATAAGTACAAAAAAATCCAATAGCTGTCAAAGGAGATGGCTTTGATTTAACTTGGAGCACAAATAAAGCATGACATATTGCAACAGAAAttgaaaaacgttttttttttttttaactttataaTAAGCAAATACCTGGATAGACTATGTTGTCACATTCTGAATTGGCAATTCACACGGGACATCCTTTCATGCTCACAGTACATTGCACCATCCATTCAAAATACAAATATATCAGCAATATGGAAAAACACATCCAATAAAGAGAAATAGTGACATGTTCTAGTAAATACAGTAGTGTTTAATAGTACACAGAGGATGACCGGAAAACACTCCCTAAGGTGTGTGTGGTGGCATTCAGTTAGCAATGAGCAGATTCACTTAGTCACTTGCTCTCGTGTTAGGTCTATGGCACTATGAGGAACATGTCAAcattacccctttttctccccaatttcgtgatatccaaattggtagttatagtcttgtcccattgctgcaactcccgtaaggagagagccatgcgtcctccgaaacatgactctgccaagccacactgcttcttgacacactgctcgcttaacccagaagcaccaatgtgtcggaggaaacacagtacagctggcgaccgaagtcagcgtgcactgcgcccaggccaccacaaggagtcgctagaacgCAATGGGACAtaccggccggccaaaccctcccctaacccggacgacgctgggccaattgtgtgccgcctcatgggtctcccggtcgcggccggctgcgacacagcccgggattgaacctgggtctgtagtgacgcctcaagcactgcagtgctttagaccgctgcgccactcggtagGCCCACGTGTCTATTTcttaactctctccctctcacatggTTGCCAACTCCTGAGttagtctctctttctctagctgcAGCTCAATGATGTTCTGTTTGTTCTGCTCCAGACGATTCTCCAGCCACTGCAGCAGGGGACCACTCACAGCAGACATCTGGCTGCACAGGTTCTTAGTGAAG
>TU1014470
TCAAAACAACAGAACCTGTACAAGCATGACAAGGCACACAATGACTAAGCAATGGCTGCTAAATAAGCTACGATGGTTACACCATACATTCACATGTAGACATCGTTTAGCTAAAAACGCTGTATTTTCCAAACGGATATAAAGCAATATCCCATCTCCCCCATCTCGTATGAAATAGTTCATTACAAATTGTCCCTCCGCCCTTCTATGAGAATCAACATTTGAGGTTTTCAGACAAAATGCCTCACTCAGGACTCAAAACTCTGCATCTGCAGGAGAGGACAAAGTTAATGGTTTGGAACATTTCCATGAAATACCTTATGAAAACATTCATAAGTACAAAAAAATCCAATAGCTGTCAAAGGAGATGGCTTTGATTTAACTTGGAGCACAAATAAAGCATGACATATTGCAACAGAAAttgaaaaacgttttttttttttttaactttataaTAAGCAAATACCTGGATAGACTATGTTGTCACATTCTGAATTGGCAATTCACACGGGACATCCTTTCATGCTCACAGTACATTGCACCATCCATTCAAAATACAAATATATCAGCAATATGGAAAAACACATCCAATAAAGAGAAATAGTGACATGTTCTAGTAAATACAGTAGTGTTTAATAGTACACAGAGGATGACCGGAAAACACTCCCTAAGGTGTGTGTGGTGGCATTCAGTTAGCAATGAGCAGATTCACTTAGTCACTTGCTCTCGTGTTAGGTCTATGGCACTATGAGGAACATGTCAAcattacccctttttctccccaatttcgtgatatccaaattggtagttatagtcttgtcccattgctgcaactcccgtaaggagagagccatgcgtcctccgaaacatgactctgccaagccacactgcttcttgacacactgctcgcttaacccagaagcaccaatgtgtcggaggaaacacagtacagctggcgaccgaagtcagcgtgcactgcgcccaggccaccacaaggagtcgctagaacgCAATGGGACAtaccggccggccaaaccctcccctaacccggacgacgctgggccaattgtgtgccgcctcatgggtctcccggtcgcggccggctgcgacacagcccgggattgaacctgggtctgtagtgacgcctcaagcactgcaatgcagtgccttagaccactgcgccactcaggagccgtatagtgccttattgcaaacaggatgaatgtttaggaatatttttttagtctgtacaggcttcctatttactctgttgtttaggttagtattgtggagtaactacaatgttgatccatcctgttTCTTCCTGTCTTagccattaaactgtaactgttttaaagtcaccattggcctcatggtgaaatccctgagcgctTTCCTTCCTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1014469 False 1367 TUCP 0.45 2 43534316 43535705
TU1014470 True 1403 TUCP 0.44 3 43534316 43600230

Neighbor

gene id symbol gene type direction distance location
LOC110533955 LOC106603171 coding upstream 73301 43306783 ~ 43461015 (+)
LOC110533952 LOC106603217 coding upstream 370121 43161094 ~ 43164195 (+)
LOC110533950 dkc1 coding upstream 415986 43111942 ~ 43118330 (+)
LOC118937075 NA coding upstream 418673 43115566 ~ 43115643 (+)
LOC118937079 NA coding upstream 419255 43114923 ~ 43115061 (+)
LOC110533964 LOC106603165 coding downstream 114346 43714576 ~ 43722473 (+)
LOC110533965 LOC106603163 coding downstream 131992 43732222 ~ 43741030 (+)
LOC110533969 LOC106603161 coding downstream 164855 43765085 ~ 43769945 (+)
LOC110533970 calm1 coding downstream 172651 43772881 ~ 43779783 (+)
LOC110533971 LOC106603157 coding downstream 183589 43783819 ~ 43879779 (+)
G891738 NA non-coding upstream 1185 43532867 ~ 43533131 (+)
G891236 NA non-coding upstream 341586 43192336 ~ 43192730 (+)
G891235 LOC106563397 non-coding upstream 342370 43191691 ~ 43191946 (+)
G891209 NA non-coding upstream 384096 43148173 ~ 43150220 (+)
G891765 NA non-coding downstream 15669 43615899 ~ 43622948 (+)
G891767 NA non-coding downstream 52440 43652670 ~ 43653498 (+)
G891813 NA non-coding downstream 74964 43675194 ~ 43676228 (+)
G891820 NA non-coding downstream 85970 43686200 ~ 43686421 (+)
G891823 NA non-coding downstream 89964 43690194 ~ 43690442 (+)
G891133 NA other upstream 424640 42982682 ~ 43109676 (+)
G891188 NA other upstream 436699 43096720 ~ 43097617 (+)
G890228 NA other upstream 1380538 42078215 ~ 42154093 (+)
G889906 LOC106603262 other upstream 1817024 41712327 ~ 41717292 (+)
LOC110533845 LOC106603305 other upstream 4722177 38755443 ~ 38815017 (+)
G891847 NA other downstream 112315 43712545 ~ 43713082 (+)
G891856 NA other downstream 142687 43742917 ~ 43743490 (+)
G891951 LOC106603153 other downstream 338182 43938412 ~ 43940557 (+)
LOC110533983 LOC106603147 other downstream 477487 44077660 ~ 44081410 (+)

Expression


Co-expression Network