G891767


Basic Information

Item Value
gene id G891767
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 43652670 ~ 43653498 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1014501
TGCTTCTTCACCCCGCAGCACCCAGCCGCCATCTTGGAACAATCTGCACCGACACACCGCTTCCGACCCATCACCGTCAACGCGGGAGGGGTGGGTGGAAACGCGGACCAGACGTAAAAATCCCACTGCGTTAATACGTACGACGGACAATGCCCCACTTTCCCTTTTTTGTCGGGCGACGTTATATTCGATATAAAGAGACCGCAATGTCACCCTAACtctgcctttaaaaaaatacGTGCCTTACGCAAAATCCTTAAGTGTTTTCTTTTAGAAGACAGCACTGGACCACTTCAAATGTTTCGATTGATCTCAGATATTGTCCAAAATACAGGCCTCTTCTTCGGAACACGATAACCACCGAAGTGATTTCACAAAGCAATCTTTCTCTCGAATAATACAGGAACTAATTCACTAGCTACCCAACAGAGAGACCACAGACTTTgatacagttagctagctaattagctagtTAACTAGACAGCCAGTAGCCAGATGTGGAGCTGTGACAGCTACTGACTGCACTGCACCCCCAGCAGCACAGAGAATCCTTTTTGTGTGGGAGTCGGGAGCTTGAGTACGCAGGACCCATACGCTTTAGCACGAATAGTACATTACGCTTCGCACCATGTAGCTTAACATTGCACCAGATGTTTACTTTCATCCGAACTTCTTGCTAGACAACTGACCCAATGTGTTGCAGCTCCAAACGTTCAAGTCGACGCAAAGTAAAATGGCATTTGGCTATGCAGTTTGATCCATCATCAGACAGCGTCAGCGCTGACCAAGTCATTTCAACAAACCAGCTGATCAGTTTGCACCTGTATTT

Function

NR:

description
AMME syndrome candidate protein 1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1014501 True 829 lncRNA 0.47 1 43652670 43653498

Neighbor

gene id symbol gene type direction distance location
LOC110533958 LOC106603168 coding upstream 39420 43566235 ~ 43613250 (+)
LOC110533955 LOC106603171 coding upstream 191655 43306783 ~ 43461015 (+)
LOC110533952 LOC106603217 coding upstream 488475 43161094 ~ 43164195 (+)
LOC118937075 NA coding upstream 537027 43115566 ~ 43115643 (+)
LOC118937079 NA coding upstream 537609 43114923 ~ 43115061 (+)
LOC110533964 LOC106603165 coding downstream 61078 43714576 ~ 43722473 (+)
LOC110533965 LOC106603163 coding downstream 78724 43732222 ~ 43741030 (+)
LOC110533969 LOC106603161 coding downstream 111587 43765085 ~ 43769945 (+)
LOC110533970 calm1 coding downstream 119383 43772881 ~ 43779783 (+)
LOC110533971 LOC106603157 coding downstream 130321 43783819 ~ 43879779 (+)
G891765 NA non-coding upstream 29722 43615899 ~ 43622948 (+)
G891748 NA non-coding upstream 53119 43547425 ~ 43599551 (+)
G891745 NA non-coding upstream 60145 43540754 ~ 43592525 (+)
G891740 LOC106603170 non-coding upstream 107030 43542466 ~ 43555517 (+)
G891742 LOC106603169 non-coding upstream 114667 43537523 ~ 43538003 (+)
G891813 NA non-coding downstream 21696 43675194 ~ 43676228 (+)
G891820 NA non-coding downstream 32702 43686200 ~ 43686421 (+)
G891823 NA non-coding downstream 36696 43690194 ~ 43690442 (+)
G891826 NA non-coding downstream 39138 43692636 ~ 43692865 (+)
G891827 NA non-coding downstream 39711 43693209 ~ 43694108 (+)
G891741 NA other upstream 52440 43534316 ~ 43600230 (+)
G891133 NA other upstream 542994 42982682 ~ 43109676 (+)
G891188 NA other upstream 555053 43096720 ~ 43097617 (+)
G890228 NA other upstream 1498892 42078215 ~ 42154093 (+)
G891847 NA other downstream 59047 43712545 ~ 43713082 (+)
G891856 NA other downstream 89419 43742917 ~ 43743490 (+)
G891951 LOC106603153 other downstream 284914 43938412 ~ 43940557 (+)
LOC110533983 LOC106603147 other downstream 424219 44077660 ~ 44081410 (+)

Expression


Co-expression Network