G891823


Basic Information

Item Value
gene id G891823
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 43690194 ~ 43690442 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1014565
CATTCTTACGTAAGGTTTGAGTGAACTAGGATTTCTTCTGAAATACTCAAACTATTCCTTTTTTTACTCAAGGGAATCAGATTTAGCTTTCTATGTTTGTGCCACTATGTCGGCGGCAGGTAGTGAAAAATCTAtttttgcccttgagcaaggcacttaacccttgtCACTGGATAAGGCTATCAGTTAAATGTACATTTATGTGGCGACATACTGCTATTTCAGTCCaatggccgtgtgtgtgtgtgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1014565 True 249 lncRNA 0.40 1 43690194 43690442

Neighbor

gene id symbol gene type direction distance location
LOC110533958 LOC106603168 coding upstream 76944 43566235 ~ 43613250 (+)
LOC110533955 LOC106603171 coding upstream 229179 43306783 ~ 43461015 (+)
LOC110533952 LOC106603217 coding upstream 525999 43161094 ~ 43164195 (+)
LOC118937075 NA coding upstream 574551 43115566 ~ 43115643 (+)
LOC118937079 NA coding upstream 575133 43114923 ~ 43115061 (+)
LOC110533964 LOC106603165 coding downstream 24134 43714576 ~ 43722473 (+)
LOC110533965 LOC106603163 coding downstream 41780 43732222 ~ 43741030 (+)
LOC110533969 LOC106603161 coding downstream 74643 43765085 ~ 43769945 (+)
LOC110533970 calm1 coding downstream 82439 43772881 ~ 43779783 (+)
LOC110533971 LOC106603157 coding downstream 93377 43783819 ~ 43879779 (+)
G891820 NA non-coding upstream 3773 43686200 ~ 43686421 (+)
G891813 NA non-coding upstream 13966 43675194 ~ 43676228 (+)
G891767 NA non-coding upstream 36696 43652670 ~ 43653498 (+)
G891765 NA non-coding upstream 67246 43615899 ~ 43622948 (+)
G891748 NA non-coding upstream 90643 43547425 ~ 43599551 (+)
G891826 NA non-coding downstream 2194 43692636 ~ 43692865 (+)
G891827 NA non-coding downstream 2767 43693209 ~ 43694108 (+)
G891834 NA non-coding downstream 13036 43703478 ~ 43703781 (+)
G891835 NA non-coding downstream 14763 43705205 ~ 43705603 (+)
G891840 NA non-coding downstream 15933 43706375 ~ 43706700 (+)
G891741 NA other upstream 89964 43534316 ~ 43600230 (+)
G891740 LOC106603170 other upstream 134677 43542466 ~ 43555517 (+)
G891133 NA other upstream 580518 42982682 ~ 43109676 (+)
G891188 NA other upstream 592577 43096720 ~ 43097617 (+)
G890228 NA other upstream 1536416 42078215 ~ 42154093 (+)
G891847 NA other downstream 22103 43712545 ~ 43713082 (+)
G891856 NA other downstream 52475 43742917 ~ 43743490 (+)
G891951 LOC106603153 other downstream 247970 43938412 ~ 43940557 (+)
LOC110533983 LOC106603147 other downstream 387275 44077660 ~ 44081410 (+)

Expression


Co-expression Network