G891827


Basic Information

Item Value
gene id G891827
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 43693209 ~ 43694108 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1014569
ttacaaagggaaacccagctgcgagctgcccagtgacgcaagcttTCTAGATGAGCTAAATGCCATCTATACTTGCTTcaaagcaagcaacactgaaccatgcgtgagaacaccagctgttccaggcgactgtgtgatcatgatctctgtagctgatgtgagtaataactttaaacaggttaacattcacaaggctgcagggacagacagacagtcttcaatgacattttcaacctctccctgacccagtctgtaatacctacatgtttcaagcagaccaccatagtacatatgcccaagaacgccaaggtaacctgtctaaattactATCGGCCCGTAGTACACACATCTGTTGCCATGAAATGCTTTTAAAGGATGATCATAGCTCACATCcacaccatcatctcagacagcctggacccactccaatttgcataccgccccaacagatccacagatgactcaaTCTCAAGGCCTCGAAGGACTCCACAGGCAGGGTGGCCACTGACCGGCTGGAGGGTTCAGGGGCGGTGATGACAGAGGCAGAGCGTGGGAGACACAGGTAGCCACTATAGTGGTTAAAACACTTCATCTCCCACCGGCAGCCTTCTGGTCTCACACATTGATATGCGAAAGATAAATGAGACAGAAGACAAGTGAAAAAGCCAGTACAGTGTGACACCATCAGATCATATGCACAGTGACAGAACTTTTTCATACACACCACTCGCTGTAACATTACAACAAATATAAACCACCCACCTTTACAGTGCTGACTCTGAACAGCCCACTCATAACCATCTGTGcactcctgagagagagagagagagagagagcagcaagatttgtgacctgttgccacaagaaaagggcaaccagtgaagaacacacaccattgta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1014569 True 900 lncRNA 0.47 1 43693209 43694108

Neighbor

gene id symbol gene type direction distance location
LOC110533958 LOC106603168 coding upstream 79959 43566235 ~ 43613250 (+)
LOC110533955 LOC106603171 coding upstream 232194 43306783 ~ 43461015 (+)
LOC110533952 LOC106603217 coding upstream 529014 43161094 ~ 43164195 (+)
LOC118937075 NA coding upstream 577566 43115566 ~ 43115643 (+)
LOC118937079 NA coding upstream 578148 43114923 ~ 43115061 (+)
LOC110533964 LOC106603165 coding downstream 20468 43714576 ~ 43722473 (+)
LOC110533965 LOC106603163 coding downstream 38114 43732222 ~ 43741030 (+)
LOC110533969 LOC106603161 coding downstream 70977 43765085 ~ 43769945 (+)
LOC110533970 calm1 coding downstream 78773 43772881 ~ 43779783 (+)
LOC110533971 LOC106603157 coding downstream 89711 43783819 ~ 43879779 (+)
G891826 NA non-coding upstream 344 43692636 ~ 43692865 (+)
G891823 NA non-coding upstream 2767 43690194 ~ 43690442 (+)
G891820 NA non-coding upstream 6788 43686200 ~ 43686421 (+)
G891813 NA non-coding upstream 16981 43675194 ~ 43676228 (+)
G891767 NA non-coding upstream 39711 43652670 ~ 43653498 (+)
G891834 NA non-coding downstream 9370 43703478 ~ 43703781 (+)
G891835 NA non-coding downstream 11097 43705205 ~ 43705603 (+)
G891840 NA non-coding downstream 12267 43706375 ~ 43706700 (+)
G891841 NA non-coding downstream 12932 43707040 ~ 43707267 (+)
G891843 NA non-coding downstream 14702 43708810 ~ 43709048 (+)
G891741 NA other upstream 92979 43534316 ~ 43600230 (+)
G891740 LOC106603170 other upstream 137692 43542466 ~ 43555517 (+)
G891133 NA other upstream 583533 42982682 ~ 43109676 (+)
G891188 NA other upstream 595592 43096720 ~ 43097617 (+)
G890228 NA other upstream 1539431 42078215 ~ 42154093 (+)
G891847 NA other downstream 18437 43712545 ~ 43713082 (+)
G891856 NA other downstream 48809 43742917 ~ 43743490 (+)
G891951 LOC106603153 other downstream 244304 43938412 ~ 43940557 (+)
LOC110533983 LOC106603147 other downstream 383609 44077660 ~ 44081410 (+)

Expression


Co-expression Network