G892033


Basic Information

Item Value
gene id G892033
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 44085693 ~ 44086002 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1014812
gtattcagaccccttgactttttccacattttgttatgatacagccttattctaaaattgattaaatgtttttttccccctcatcaatctacatacattaccccataatgacaaagtgaaaacaggtttttagacatttttgcaaatgtactgaaaataaaaatggatatgtcacatttacataagatttcagaccctttactgagcactttgttgaaacacctttggcaacgattacagcatcaagtcttcttggttatgaagctacaagcttggcacacctgtatttggagagtttctctcattcttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1014812 True 310 lncRNA 0.35 1 44085693 44086002

Neighbor

gene id symbol gene type direction distance location
LOC110533983 LOC106603147 coding upstream 5497 44077660 ~ 44081410 (+)
LOC110533982 LOC106603146 coding upstream 8581 44067882 ~ 44077112 (+)
LOC110533981 LOC106603149 coding upstream 32698 44036575 ~ 44052995 (+)
LOC110533975 LOC106603152 coding upstream 106581 43963080 ~ 43979112 (+)
fkbp2 LOC106603154 coding upstream 191856 43889348 ~ 43893837 (+)
bscl2 LOC106563482 coding downstream 11258 44097260 ~ 44100856 (+)
LOC110533985 LOC106603139 coding downstream 22331 44108333 ~ 44123770 (+)
LOC110533994 cnih2 coding downstream 173511 44259513 ~ 44268977 (+)
mrpl49 mrpl49 coding downstream 197816 44283818 ~ 44285540 (+)
LOC110533999 NA coding downstream 201534 44287536 ~ 44288301 (+)
G891988 NA non-coding upstream 77964 44006821 ~ 44007729 (+)
G891884 NA non-coding upstream 303528 43781958 ~ 43782165 (+)
G891866 NA non-coding upstream 329153 43754897 ~ 43756540 (+)
G891854 NA non-coding upstream 343207 43741930 ~ 43742486 (+)
G891853 NA non-coding upstream 353662 43731639 ~ 43732031 (+)
G892034 NA non-coding downstream 83 44086085 ~ 44086339 (+)
G892054 NA non-coding downstream 51597 44137599 ~ 44137831 (+)
G892048 NA non-coding downstream 64763 44150765 ~ 44155040 (+)
G892067 NA non-coding downstream 79260 44165262 ~ 44165505 (+)
G892071 NA non-coding downstream 83953 44169955 ~ 44170190 (+)
G891951 LOC106603153 other upstream 145136 43938412 ~ 43940557 (+)
G891856 NA other upstream 342203 43742917 ~ 43743490 (+)
LOC110533965 LOC106603163 other upstream 344663 43732222 ~ 43741030 (+)
G891847 NA other upstream 372611 43712545 ~ 43713082 (+)
G892191 NA other downstream 569556 44655558 ~ 44659491 (+)
G892499 LOC106603104 other downstream 922832 45008834 ~ 45010849 (+)
LOC110534033 LOC106603099 other downstream 1468235 45553481 ~ 45592329 (+)
LOC110534042 LOC106603097 other downstream 1536255 45622164 ~ 45654911 (+)
LOC110534056 LOC106603182 other downstream 1815043 45898515 ~ 45901940 (+)

Expression


Co-expression Network