Gene
RNA
| Item | Value |
|---|---|
| gene id | G893120 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 44196942 ~ 44197282 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1016032 | True | 341 | lncRNA | 0.40 | 1 | 44196942 | 44197282 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533989 | LOC106603141 | coding | downstream | 17565 | 44172874 ~ 44179377 (-) |
| LOC110533988 | LOC105010947 | coding | downstream | 31376 | 44142744 ~ 44165566 (-) |
| LOC110533987 | LOC106603145 | coding | downstream | 62289 | 44123978 ~ 44134653 (-) |
| LOC110533984 | LOC106603148 | coding | downstream | 111672 | 44079886 ~ 44085270 (-) |
| LOC110533979 | LOC106603150 | coding | downstream | 166951 | 43996131 ~ 44029991 (-) |
| LOC110533117 | stx5 | coding | upstream | 1896 | 44199178 ~ 44209264 (-) |
| LOC110533991 | pura2 | coding | upstream | 15973 | 44213255 ~ 44218956 (-) |
| LOC110533990 | LOC106603140 | coding | upstream | 21765 | 44219047 ~ 44237878 (-) |
| LOC110533992 | NA | coding | upstream | 50982 | 44248264 ~ 44258913 (-) |
| tm7sf2 | tm7sf2 | coding | upstream | 91066 | 44288348 ~ 44294245 (-) |
| G893230 | NA | non-coding | downstream | 15007 | 44181605 ~ 44181935 (-) |
| G893229 | NA | non-coding | downstream | 15369 | 44181345 ~ 44181573 (-) |
| G893228 | NA | non-coding | downstream | 15726 | 44181014 ~ 44181216 (-) |
| G893222 | NA | non-coding | downstream | 27185 | 44169544 ~ 44169757 (-) |
| G893126 | NA | non-coding | upstream | 239 | 44197521 ~ 44197890 (-) |
| G893265 | NA | non-coding | upstream | 31680 | 44228962 ~ 44238819 (-) |
| G893269 | NA | non-coding | upstream | 44986 | 44242268 ~ 44242544 (-) |
| G893275 | NA | non-coding | upstream | 72949 | 44270231 ~ 44270447 (-) |
| G892965 | NA | other | downstream | 485973 | 43710485 ~ 43710969 (-) |
| LOC110533962 | LOC106603031 | other | downstream | 513022 | 43681449 ~ 43686604 (-) |
| LOC110533954 | LOC106603192 | other | downstream | 949307 | 43183815 ~ 43248006 (-) |
| LOC110533946 | mpp1 | other | downstream | 1126784 | 43057611 ~ 43070230 (-) |
| G890403 | NA | other | downstream | 2118995 | 42076741 ~ 42077947 (-) |
| LOC110534000 | frmd8 | other | upstream | 108937 | 44303605 ~ 44308978 (-) |
| G893541 | NA | other | upstream | 571168 | 44768450 ~ 44769072 (-) |
| LOC110534025 | LOC106603111 | other | upstream | 814047 | 45011329 ~ 45017446 (-) |
| LOC110534046 | LOC107567170 | other | upstream | 1550033 | 45747090 ~ 45751405 (-) |
