G892128


Basic Information

Item Value
gene id G892128
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 44246595 ~ 44247141 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1014921
gaaattgctttcttcttgccactcttccataaaggccagatttgtgcaatatatgactgattgttgtcctatggacagagtctcccacctcagctgtagatgtctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcacttgcacagtgctccttgggatgtttaaagcttgggaaatatttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttgacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1014921 True 547 lncRNA 0.44 1 44246595 44247141

Neighbor

gene id symbol gene type direction distance location
LOC110533985 LOC106603139 coding upstream 122825 44108333 ~ 44123770 (+)
bscl2 LOC106563482 coding upstream 145739 44097260 ~ 44100856 (+)
LOC110533983 LOC106603147 coding upstream 166399 44077660 ~ 44081410 (+)
LOC110533982 LOC106603146 coding upstream 169483 44067882 ~ 44077112 (+)
LOC110533981 LOC106603149 coding upstream 193600 44036575 ~ 44052995 (+)
LOC110533994 cnih2 coding downstream 12372 44259513 ~ 44268977 (+)
mrpl49 mrpl49 coding downstream 36677 44283818 ~ 44285540 (+)
LOC110533999 NA coding downstream 40395 44287536 ~ 44288301 (+)
LOC110534002 LOC106603131 coding downstream 73098 44320239 ~ 44325686 (+)
LOC118966633 LOC106603129 coding downstream 83043 44330184 ~ 44340628 (+)
G892125 NA non-coding upstream 5008 44240697 ~ 44241587 (+)
G892114 NA non-coding upstream 5927 44228825 ~ 44240668 (+)
G892096 NA non-coding upstream 52652 44193712 ~ 44193943 (+)
G892090 NA non-coding upstream 60347 44185844 ~ 44186248 (+)
G892071 NA non-coding upstream 76405 44169955 ~ 44170190 (+)
G892073 NA non-coding downstream 6342 44253483 ~ 44253984 (+)
G892132 NA non-coding downstream 23286 44270427 ~ 44270630 (+)
G892157 NA non-coding downstream 54653 44301794 ~ 44304579 (+)
G892185 NA non-coding downstream 150725 44397866 ~ 44398095 (+)
G892208 NA non-coding downstream 239940 44487081 ~ 44487857 (+)
G891951 LOC106603153 other upstream 306038 43938412 ~ 43940557 (+)
G891856 NA other upstream 503105 43742917 ~ 43743490 (+)
LOC110533965 LOC106603163 other upstream 505565 43732222 ~ 43741030 (+)
G891847 NA other upstream 533513 43712545 ~ 43713082 (+)
G892191 NA other downstream 408417 44655558 ~ 44659491 (+)
G892499 LOC106603104 other downstream 761693 45008834 ~ 45010849 (+)
LOC110534033 LOC106603099 other downstream 1307096 45553481 ~ 45592329 (+)
LOC110534042 LOC106603097 other downstream 1375116 45622164 ~ 45654911 (+)
LOC110534056 LOC106603182 other downstream 1653904 45898515 ~ 45901940 (+)

Expression


Co-expression Network