Gene
RNA
| Item | Value |
|---|---|
| gene id | G893280 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 44285108 ~ 44285959 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| 39S ribosomal protein L49, mitochondrial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1016202 | True | 788 | lncRNA | 0.37 | 2 | 44285108 | 44285959 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533992 | NA | coding | downstream | 26195 | 44248264 ~ 44258913 (-) |
| LOC110533990 | LOC106603140 | coding | downstream | 47230 | 44219047 ~ 44237878 (-) |
| LOC110533991 | pura2 | coding | downstream | 66152 | 44213255 ~ 44218956 (-) |
| LOC110533117 | stx5 | coding | downstream | 78263 | 44199178 ~ 44209264 (-) |
| LOC110533989 | LOC106603141 | coding | downstream | 105731 | 44172874 ~ 44179377 (-) |
| tm7sf2 | tm7sf2 | coding | upstream | 2389 | 44288348 ~ 44294245 (-) |
| LOC110533996 | LOC106603134 | coding | upstream | 8579 | 44294538 ~ 44301656 (-) |
| LOC110534000 | frmd8 | coding | upstream | 17646 | 44303605 ~ 44308978 (-) |
| LOC110534001 | LOC106603132 | coding | upstream | 26194 | 44312153 ~ 44319559 (-) |
| LOC110534010 | NA | coding | upstream | 225530 | 44511489 ~ 44513298 (-) |
| G893275 | NA | non-coding | downstream | 14661 | 44270231 ~ 44270447 (-) |
| G893269 | NA | non-coding | downstream | 42564 | 44242268 ~ 44242544 (-) |
| G893265 | NA | non-coding | downstream | 46289 | 44228962 ~ 44238819 (-) |
| G893126 | NA | non-coding | downstream | 87218 | 44197521 ~ 44197890 (-) |
| G893287 | NA | non-coding | upstream | 34311 | 44320270 ~ 44323970 (-) |
| G893253 | NA | non-coding | upstream | 61831 | 44347790 ~ 44349638 (-) |
| G893325 | NA | non-coding | upstream | 106116 | 44392075 ~ 44392427 (-) |
| G893391 | NA | non-coding | upstream | 197315 | 44483274 ~ 44483554 (-) |
| G893394 | NA | non-coding | upstream | 201061 | 44487020 ~ 44487986 (-) |
| G892965 | NA | other | downstream | 574139 | 43710485 ~ 43710969 (-) |
| LOC110533962 | LOC106603031 | other | downstream | 601188 | 43681449 ~ 43686604 (-) |
| LOC110533954 | LOC106603192 | other | downstream | 1037473 | 43183815 ~ 43248006 (-) |
| LOC110533946 | mpp1 | other | downstream | 1214950 | 43057611 ~ 43070230 (-) |
| G893541 | NA | other | upstream | 482491 | 44768450 ~ 44769072 (-) |
| LOC110534025 | LOC106603111 | other | upstream | 725370 | 45011329 ~ 45017446 (-) |
| LOC110534046 | LOC107567170 | other | upstream | 1461356 | 45747090 ~ 45751405 (-) |
| G894917 | NA | other | upstream | 1631320 | 45917279 ~ 45918339 (-) |
