G893358


Basic Information

Item Value
gene id G893358
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 44602525 ~ 44603869 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1016286
TATTTATTGCATTCAACAACATACAAAAGTTCTCAATGATCAGAGGTCATCTGTAAAGAAACTAATCTCAGTGCTAGAATAGCTGGTGGCTccaacctaacagaacaaacCATTGAGGAAGAACACACTTCAAACACAGCTGCTTCATGACGGAACTAAATCAGGCTTCTATTTGGTGCTCTGACCTGCTCTGTTAACAGAGTCAGGATTTATGAGAGGTTGGTTGGTAGTGGGGACTCCTTGGTGGTCTTCCTATCGAATTAGGTACTTATTAAAGGCCTACACTGAAAATACGACAGGTAACTAACTACACCTGGGATAATTAGCAGCTCCAGCAACCAGTGTGTACAACACTCAACAGTCTGCCCACTCCTCTTCAAcatacagtgtggcaaaaaagtatttagaactactttttttgccccactgtacagtaCCCGTCAatagttttgacacacctactcattcaagggtttttctttagtttgactattttctacattgtataattatagtgaagacatccaaactatgaaataacacttattgGTCATGTactgaccaaaaaagtgttaaacaaatcaaaatatattttatatttgagattctttaaagtagcaaATCTtggctttgatgacagcttttcacactcttagtatcgctgcagaatgctgtggtagccatgctggctaagtgtgccttgaattctaaataagacagacagtgtcactagcaaagcacccccacacctcctcttccatgcttcacggtgggaactacatgTGCAGAGATCCTCCACTCACCTACTGAGTCTCACAAGACACGGCaggtggaaccaaaaatctcaagtttggactcatcagaccaaaggacaccagtctcaccagtctaatgttcattgcttgtgtttcttggcccaagcaagtctcttcttattattggtgtcctttagtagtggtttctttgcagcaattcgaccatgaaggcctgattcaagcagtcgcctctgaacagttgatgttgagatgtcttaACATTTtcagaattgactgaccttcatgtcttaaagtaatgatggactgtaatttctccttgcttatttgagctgttcttgccataatatggacttggccttttaccaaataatgttatcttctgtataccacccctaccttgtcacatcaaAACTGATTGCCTCAAATGCATTacgaaggaaataaattccacaaataaacaaggcccatctgttaattgaaatgcattccaagtgattacctcatgaagctggctgagagaatgccaagagtgtgcaaagctgtcatcaaggcaaagggtggcgactttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1016286 True 1345 lncRNA 0.41 1 44602525 44603869

Neighbor

gene id symbol gene type direction distance location
LOC110534010 NA coding downstream 89227 44511489 ~ 44513298 (-)
LOC110534001 LOC106603132 coding downstream 282966 44312153 ~ 44319559 (-)
LOC110534000 frmd8 coding downstream 293547 44303605 ~ 44308978 (-)
LOC110533996 LOC106603134 coding downstream 300869 44294538 ~ 44301656 (-)
tm7sf2 tm7sf2 coding downstream 308280 44288348 ~ 44294245 (-)
LOC110534015 LOC106603119 coding upstream 22053 44625922 ~ 44636337 (-)
LOC110534016 LOC106603120 coding upstream 36376 44640245 ~ 44648066 (-)
LOC110534017 LOC106603118 coding upstream 51675 44655544 ~ 44751420 (-)
LOC110534019 LOC106603116 coding upstream 171499 44775368 ~ 44812908 (-)
LOC110534021 LOC106603115 coding upstream 214641 44818510 ~ 44821307 (-)
G893457 NA non-coding downstream 5234 44596593 ~ 44597291 (-)
G893437 NA non-coding downstream 27628 44574691 ~ 44574897 (-)
G893436 NA non-coding downstream 28132 44574090 ~ 44574393 (-)
G893421 NA non-coding downstream 69095 44531606 ~ 44533430 (-)
G893396 NA non-coding downstream 110449 44491819 ~ 44492076 (-)
G893462 NA non-coding upstream 4526 44608395 ~ 44608606 (-)
G893463 NA non-coding upstream 5561 44609430 ~ 44609639 (-)
G893466 NA non-coding upstream 12064 44615933 ~ 44616197 (-)
G893469 NA non-coding upstream 14463 44618332 ~ 44618585 (-)
G893356 LOC100194703 non-coding upstream 17552 44621421 ~ 44623804 (-)
LOC110533117 stx5 other downstream 393261 44199178 ~ 44209264 (-)
G892965 NA other downstream 891556 43710485 ~ 43710969 (-)
LOC110533962 LOC106603031 other downstream 918605 43681449 ~ 43686604 (-)
LOC110533954 LOC106603192 other downstream 1354890 43183815 ~ 43248006 (-)
G893541 NA other upstream 164581 44768450 ~ 44769072 (-)
LOC110534025 LOC106603111 other upstream 407460 45011329 ~ 45017446 (-)
LOC110534046 LOC107567170 other upstream 1143446 45747090 ~ 45751405 (-)
G894917 NA other upstream 1313410 45917279 ~ 45918339 (-)
LOC110534118 LOC106603020 other upstream 2626935 47203241 ~ 47234608 (-)

Expression


Co-expression Network