G892210


Basic Information

Item Value
gene id G892210
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 44662066 ~ 44662371 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1015015
gttcagaggagacgttACCCTACCTTCCTAACAACACCAAGTACATGCATTCTCCCAACTCCTGCTAACCCACCGTCTTCCCATTTGCAAACCACCCCCGTCCTCCTCACCGTGGTGAGTTTCTCCAGCAGGGTGAAGCGTTCCTCCCAGCCGGCGGCCAGCTTCTCGAAGGCCTCGTGGCGTTTGATCAGGCTCTCCACCTCGTCCACGTTAGAGCCCAGCTCGGCCCCCCGCACCAGGGGCTCCTGGCCTGCCAGCCACGTCTCTGCCACGCACGCATCCCGGCCAAACTGCAGCACCTCCAGA

Function

NR:

description
PREDICTED: spectrin beta chain, non-erythrocytic 1-like isoform X5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1015015 True 306 lncRNA 0.62 1 44662066 44662371

Neighbor

gene id symbol gene type direction distance location
LOC110534014 LOC106603122 coding upstream 39390 44613844 ~ 44622676 (+)
LOC110534013 LOC106603121 coding upstream 60113 44574931 ~ 44601953 (+)
LOC110534011 LOC106603123 coding upstream 88196 44526662 ~ 44573870 (+)
LOC110534008 LOC106603125 coding upstream 158512 44494158 ~ 44503554 (+)
LOC110533118 LOC106563456 coding upstream 182922 44477086 ~ 44479144 (+)
LOC110534018 LOC106603117 coding downstream 102860 44765231 ~ 44767832 (+)
LOC110534023 LOC106603103 coding downstream 330915 44993286 ~ 45003089 (+)
LOC110534027 LOC106603105 coding downstream 378390 45040761 ~ 45124746 (+)
LOC100135968 LOC100135968 coding downstream 463181 45125552 ~ 45149685 (+)
LOC110534924 NA coding downstream 492041 45154412 ~ 45155664 (+)
G892293 NA non-coding upstream 22930 44637764 ~ 44639136 (+)
G892286 NA non-coding upstream 31463 44629279 ~ 44630603 (+)
G892284 NA non-coding upstream 44100 44617724 ~ 44617966 (+)
G892283 NA non-coding upstream 45726 44616125 ~ 44616340 (+)
G892281 NA non-coding upstream 51755 44610058 ~ 44610311 (+)
G892198 NA non-coding downstream 1325 44663696 ~ 44663924 (+)
G892192 NA non-coding downstream 1891 44664262 ~ 44664623 (+)
G892200 LOC106603118 non-coding downstream 4176 44666547 ~ 44666818 (+)
G892203 LOC106603118 non-coding downstream 4739 44667110 ~ 44667324 (+)
G892201 LOC106603118 non-coding downstream 5101 44667472 ~ 44667722 (+)
G892191 NA other upstream 2575 44655558 ~ 44659491 (+)
LOC110533983 LOC106603147 other upstream 580656 44077660 ~ 44081410 (+)
G891951 LOC106603153 other upstream 721509 43938412 ~ 43940557 (+)
G891856 NA other upstream 918576 43742917 ~ 43743490 (+)
LOC110533965 LOC106603163 other upstream 921036 43732222 ~ 43741030 (+)
G892499 LOC106603104 other downstream 346463 45008834 ~ 45010849 (+)
LOC110534033 LOC106603099 other downstream 891866 45553481 ~ 45592329 (+)
LOC110534042 LOC106603097 other downstream 959886 45622164 ~ 45654911 (+)
LOC110534056 LOC106603182 other downstream 1238674 45898515 ~ 45901940 (+)
G894204 LOC100136012 other downstream 1453914 46116285 ~ 46117943 (+)

Expression


Co-expression Network