Gene
RNA
| Item | Value |
|---|---|
| gene id | G892203 |
| gene name | LOC106603118 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 44667110 ~ 44667324 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| spectrin beta chain, non-erythrocytic 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1015008 | True | 215 | lncRNA | 0.64 | 1 | 44667110 | 44667324 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110534014 | LOC106603122 | coding | upstream | 44434 | 44613844 ~ 44622676 (+) |
| LOC110534013 | LOC106603121 | coding | upstream | 65157 | 44574931 ~ 44601953 (+) |
| LOC110534011 | LOC106603123 | coding | upstream | 93240 | 44526662 ~ 44573870 (+) |
| LOC110534008 | LOC106603125 | coding | upstream | 163556 | 44494158 ~ 44503554 (+) |
| LOC110533118 | LOC106563456 | coding | upstream | 187966 | 44477086 ~ 44479144 (+) |
| LOC110534018 | LOC106603117 | coding | downstream | 97907 | 44765231 ~ 44767832 (+) |
| LOC110534023 | LOC106603103 | coding | downstream | 325962 | 44993286 ~ 45003089 (+) |
| LOC110534027 | LOC106603105 | coding | downstream | 373437 | 45040761 ~ 45124746 (+) |
| LOC100135968 | LOC100135968 | coding | downstream | 458228 | 45125552 ~ 45149685 (+) |
| LOC110534924 | NA | coding | downstream | 487088 | 45154412 ~ 45155664 (+) |
| G892200 | LOC106603118 | non-coding | upstream | 292 | 44666547 ~ 44666818 (+) |
| G892192 | NA | non-coding | upstream | 2487 | 44664262 ~ 44664623 (+) |
| G892198 | NA | non-coding | upstream | 3186 | 44663696 ~ 44663924 (+) |
| G892210 | NA | non-coding | upstream | 4739 | 44662066 ~ 44662371 (+) |
| G892293 | NA | non-coding | upstream | 27974 | 44637764 ~ 44639136 (+) |
| G892201 | LOC106603118 | non-coding | downstream | 148 | 44667472 ~ 44667722 (+) |
| G892532 | NA | non-coding | downstream | 390526 | 45057850 ~ 45166003 (+) |
| G892607 | NA | non-coding | downstream | 526673 | 45193997 ~ 45280893 (+) |
| G892191 | NA | other | upstream | 7619 | 44655558 ~ 44659491 (+) |
| LOC110533983 | LOC106603147 | other | upstream | 585700 | 44077660 ~ 44081410 (+) |
| G891951 | LOC106603153 | other | upstream | 726553 | 43938412 ~ 43940557 (+) |
| G891856 | NA | other | upstream | 923620 | 43742917 ~ 43743490 (+) |
| LOC110533965 | LOC106603163 | other | upstream | 926080 | 43732222 ~ 43741030 (+) |
| G892499 | LOC106603104 | other | downstream | 341510 | 45008834 ~ 45010849 (+) |
| LOC110534033 | LOC106603099 | other | downstream | 886913 | 45553481 ~ 45592329 (+) |
| LOC110534042 | LOC106603097 | other | downstream | 954933 | 45622164 ~ 45654911 (+) |
| LOC110534056 | LOC106603182 | other | downstream | 1233721 | 45898515 ~ 45901940 (+) |
| G894204 | LOC100136012 | other | downstream | 1448961 | 46116285 ~ 46117943 (+) |
