G893508


Basic Information

Item Value
gene id G893508
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 44954180 ~ 44959512 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1016460
ggattgctaaGAGATtgttggaggtagggattgctaaGAGATtgttggaggtagggattgctgagagagattttggaggtaggaattgctgagagagattttgctagagagattttgctgaggtcattgcagaggtcattgcagagtgaTTGATTGTGATAGAGAGATTTTTGCTGGAGGTTGatttgctgggagttcattgctgggaagttggtatgttttgtgagtttgttgctcagatatAGCTTATTTGATGtactttgtttcttagtttgtttgtgaaattgtttaatatcctgtttcatttgttcccagggggaaaggggaaggcaccttgggagtgcttaggcaagaggcccacgggcatacatatacccgtagtatattcattgtctaggtacactaggtaagacctgggcggaccaccccctgtattttggttagggcaccaggtggtgctaaattaggtaagtggtgggtaggcaggtaagataggagaggggggctttgagatttactttctttgctttggttccgtccagccccttttccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1016460 True 553 lncRNA 0.45 3 44954180 44959512

Neighbor

gene id symbol gene type direction distance location
LOC110534022 LOC106603114 coding downstream 102780 44845577 ~ 44851400 (-)
LOC118936697 NA coding downstream 111057 44840712 ~ 44843123 (-)
LOC110534021 LOC106603115 coding downstream 132873 44818510 ~ 44821307 (-)
LOC110534019 LOC106603116 coding downstream 141272 44775368 ~ 44812908 (-)
LOC110534017 LOC106603118 coding downstream 202760 44655544 ~ 44751420 (-)
LOC110534024 LOC106603104 coding upstream 43729 45003241 ~ 45010947 (-)
LOC110534025 LOC106603111 coding upstream 53701 45011329 ~ 45017446 (-)
LOC110534028 LOC106603112 coding upstream 206106 45165618 ~ 45181163 (-)
LOC110534031 LOC106603108 coding upstream 367799 45327311 ~ 45381903 (-)
LOC110534045 psmb6 coding upstream 656362 45615874 ~ 45629020 (-)
G893497 NA non-coding downstream 237626 44716298 ~ 44716554 (-)
G893477 NA non-coding downstream 299146 44654813 ~ 44655034 (-)
G893357 NA non-coding downstream 315054 44637774 ~ 44639126 (-)
G893356 LOC100194703 non-coding downstream 330376 44621421 ~ 44623804 (-)
G893782 NA non-coding upstream 233617 45193129 ~ 45280890 (-)
G893822 NA non-coding upstream 302631 45262143 ~ 45263484 (-)
G893781 NA non-coding upstream 314962 45274474 ~ 45278522 (-)
G893834 NA non-coding upstream 328640 45288152 ~ 45288513 (-)
G893809 NA non-coding upstream 364454 45323966 ~ 45326807 (-)
G893541 NA other downstream 185108 44768450 ~ 44769072 (-)
LOC110534000 frmd8 other downstream 645247 44303605 ~ 44308978 (-)
LOC110533117 stx5 other downstream 744916 44199178 ~ 44209264 (-)
G892965 NA other downstream 1243211 43710485 ~ 43710969 (-)
LOC110533962 LOC106603031 other downstream 1270260 43681449 ~ 43686604 (-)
LOC110534046 LOC107567170 other upstream 787803 45747090 ~ 45751405 (-)
G894917 NA other upstream 957767 45917279 ~ 45918339 (-)
LOC110534118 LOC106603020 other upstream 2271292 47203241 ~ 47234608 (-)
G896841 NA other upstream 3028249 47987761 ~ 47989076 (-)

Expression


Co-expression Network