G892499 (LOC106603104)


Basic Information

Item Value
gene id G892499
gene name LOC106603104
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 45008834 ~ 45010849 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1015341
TCTAGAGCAGCCAAGGCCCTCTCTGCATCTTTCCTGGTCATAAAGGCCACGAAGCCTCTGTTTGTGACCCTGGTACGTTCCTCGTCACTACGGGGCCACATGATCTTCACGCTTGCCAGGGGACCATACTTGCCAAACTCTTTGCAAAGCATTTCTTCATTCATCTTTGGGTTAATGCAGCCAATGTACAGGTTCGTTGTGTTCGGTGTTGCTGGGTCATCATCAAATATTGATCGTCGTGTTAGTGGTATGTCCAATTCTCCATACCCTCCTCCAGGCTCATTCTTCTTTTTTTTGTGCCTTTCTTCACGTTCCTCCTGTATTTGCTTTAGCTCCTCTTTGAAAAGTTCAAGGttgctcttcttcttctcttctgtcTTCTTTTTAACAATCGGCCTTCTGACTTCCGAAGAGTGTGCTGGTGAGACATTCTGGGACACTGAAGTAAACTTCGTGTTCGGTCGGTAAAGCTTGCTCTTTTTGACCTCTGCTGCTTCCTCTTCTTTAGTTGCATTCACGATCCCCCCACGAACAAACGTTTTCACCCCACTTTTGTCGTTACTGTCAAAAGATGCTAAAAACTCTTCAAAAACGTCAGCTGCTTTTTCTTGTTCCTTTTTCTTCAGATCTTCTTGTTCTCTCTTGGTCAATGTTCTCTTAACACCTACAGGTTTCCCTTTCTTGCCATTTTTGTCTGCCATGCTGATACGTAGAAATGTACAATGCGTTTGTTATTGCTCCACCATTTTGAATAGACAAAAAT

Function

NR:

description
U2 snRNP-associated SURP motif-containing protein-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1015341 True 763 TUCP 0.44 8 45008834 45010849

Neighbor

gene id symbol gene type direction distance location
LOC110534023 LOC106603103 coding upstream 5745 44993286 ~ 45003089 (+)
LOC110534018 LOC106603117 coding upstream 241002 44765231 ~ 44767832 (+)
LOC110534014 LOC106603122 coding upstream 386158 44613844 ~ 44622676 (+)
LOC110534013 LOC106603121 coding upstream 406881 44574931 ~ 44601953 (+)
LOC110534011 LOC106603123 coding upstream 434964 44526662 ~ 44573870 (+)
LOC110534027 LOC106603105 coding downstream 29912 45040761 ~ 45124746 (+)
LOC100135968 LOC100135968 coding downstream 114703 45125552 ~ 45149685 (+)
LOC110534924 NA coding downstream 143563 45154412 ~ 45155664 (+)
LOC110534029 LOC106603110 coding downstream 189835 45200684 ~ 45276970 (+)
LOC110534030 LOC106603107 coding downstream 279708 45290557 ~ 45326891 (+)
G892201 LOC106603118 non-coding upstream 341112 44667472 ~ 44667722 (+)
G892203 LOC106603118 non-coding upstream 341510 44667110 ~ 44667324 (+)
G892200 LOC106603118 non-coding upstream 342016 44666547 ~ 44666818 (+)
G892192 NA non-coding upstream 344211 44664262 ~ 44664623 (+)
G892198 NA non-coding upstream 344910 44663696 ~ 44663924 (+)
G892532 NA non-coding downstream 47001 45057850 ~ 45166003 (+)
G892607 NA non-coding downstream 183148 45193997 ~ 45280893 (+)
G892191 NA other upstream 349343 44655558 ~ 44659491 (+)
LOC110533983 LOC106603147 other upstream 927424 44077660 ~ 44081410 (+)
G891951 LOC106603153 other upstream 1068277 43938412 ~ 43940557 (+)
G891856 NA other upstream 1265344 43742917 ~ 43743490 (+)
LOC110533965 LOC106603163 other upstream 1267804 43732222 ~ 43741030 (+)
LOC110534033 LOC106603099 other downstream 543388 45553481 ~ 45592329 (+)
LOC110534042 LOC106603097 other downstream 611408 45622164 ~ 45654911 (+)
LOC110534056 LOC106603182 other downstream 890196 45898515 ~ 45901940 (+)
G894204 LOC100136012 other downstream 1105436 46116285 ~ 46117943 (+)
G894437 LOC106603023 other downstream 1616443 46627292 ~ 46700540 (+)

Expression


Co-expression Network