G892607


Basic Information

Item Value
gene id G892607
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 45193997 ~ 45280893 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1015467
gacagctttgcacactcttggcattctctcaaccagcttcacctggaatgcttttccaacagtcttgaaagagttcccacatatgctgagcacttgttggctgcttttcctttactctgcggtccaactcatcccaaaccatctcaattgggttgaggtcaggtgattgtggaggccaggtcatctgatgcagcactccatcactctccttcttggtcaaaaagcccttacaccgcctggaggtgtgttgggtcattgtcatgttgaaaaacaaatgatagttccactaagcgcaaaccagatgggatggtgtatcactgcagaatgctgtggtagccatgctggttaagtgtgccttgaattctaaataactcacagacagtgtcaccagcaaagcacctccacacctcctccatgcttcacggtgggaaccacacatgcggagatcatctgttcacctactctgcgtctcacaaagacatggtggttggaaccaataATCTCAAATTGGACCCATCAGGActcatttctgaggctggtaactctaatgaacttatcctctgcagcagaggtaactctgggttttcctttcctgtggcagtcctcatgagagccagtttcatcctaacacttgatggtttttgcaaatgcacttgaagaaactttcaaagttcttgacattttctgtattgactgaccttcatgtcatgaaggactgtcgtttctcttggtttatttgagcttttcttgccataaatggacttggtcttttacgaaatagggctatcttctgtataccacccctaccttgtcacaacacaactgattggctcaaatgcattaagaaggaaagaaattccacaaatgatcttttaacaaggcacacctgttaattgaaatgcattccaggtgactacctcacgaagctggttgagagaatgccaagagtgtgcgaatctgtcatcaaggcaaagggtggctactttgaagaatctcaaatataaaatatatctgtttaacaattttttggttactacattattccataagtgttatttcatattgttgacaccttcactattattctacaatgtgtaaaatagtaaaaataaagaaaaaacccttgaatgagtagttgtgtccaaactggtactgtaaatacacacatgcttgcacacacacaaagacacacagattcagacacagacatactgtacaccaTATGACAAAGTTGATTCGAATTGGACAGGGCTTTTGGACATATCTGTAAAATATTCTCTTACCAGACTCAACATTCTACCATGGTGCTAGGAATCCCCAAATAGAGTCCATTTAAGAGACCATTCAAACCTTTATACAATACTGTACGCAGGGGTGATGCTTTCATGAATAACCAATACTATCATCAATGGGGTTGTAAAGAAATGTTCCTCACTACAATATTACTCAACAATAATAAACAGATTGATAAAATAGTTACATTTGTTCGATAATGTAGCTAAGAAACTAACGTTGTTCTCGTGTATTATTTGTAACAACTCGAAGGGCGGTTTACCTTAGAAGGCTAGTCAACAACAGACTTAACAGCCATAAGTCATCCCCTGTCAGCCGCGGATCATAGAGCTATTCATCTGTGGTCATTACTGAGCATCGTTACTGATCACAATGACTGATACACACTGAATATGTATAGCACATTAGTCAACAGATGGCCCAAACTGCCTTCATATAGTTCACGTtcctgtaaacaaaaacaaaaaacaatcatGATTGTCAGATCATCTCATTTGCTGGTTGAGCTGTCCGTGTGTACGATTCTCTGTCATGCCCTCTTTGTTTGCCTTTGTTTTCATCAATATTCATTTTGCGAGAAATTCCTTTTGCTCGTGGATATTTCTACTGTTATCGACTTTAGAAGGAAAAGAAACAAACTTTCCGTAGTTTAGAGGATAGTTTGCAAAATTATAGAATTAGACCTGTGGCTTGCTGTATGTTCCTTTAGTTTCTCATATGTGAGTTTTGTCTCCAAAAAATAACTTATCTTTGTAAAATGAAACCTTTTTAAGTCTGATTGCATGCTTTTTAAATCCCACGAGTAGACTACATTGTACCAATATTGAGGTTGATTGAGTTTTCTATGGTCCTTACACAACTGTACAATGTAAAGATCAAAACTGAGTGAAATTAAAATACAAAGCTATCATTTTTGTGAACATTGCTGTCATATAAAAAAGATCAACAACAAATAAATTTGATTACATGAAAAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1015467 True 2267 lncRNA 0.39 2 45193997 45280893

Neighbor

gene id symbol gene type direction distance location
LOC110534924 NA coding upstream 38333 45154412 ~ 45155664 (+)
LOC100135968 LOC100135968 coding upstream 44312 45125552 ~ 45149685 (+)
LOC110534027 LOC106603105 coding upstream 70922 45040761 ~ 45124746 (+)
LOC110534023 LOC106603103 coding upstream 190908 44993286 ~ 45003089 (+)
LOC110534018 LOC106603117 coding upstream 426165 44765231 ~ 44767832 (+)
LOC110534030 LOC106603107 coding downstream 9664 45290557 ~ 45326891 (+)
LOC118937071 NA coding downstream 81340 45362233 ~ 45362286 (+)
LOC118936925 LOC106603184 coding downstream 157298 45438191 ~ 45443347 (+)
LOC110534037 LOC106603102 coding downstream 164185 45445078 ~ 45450123 (+)
LOC110534036 LOC106563427 coding downstream 178767 45459660 ~ 45549430 (+)
G892532 NA non-coding upstream 27994 45057850 ~ 45166003 (+)
G892201 LOC106603118 non-coding upstream 526275 44667472 ~ 44667722 (+)
G892203 LOC106603118 non-coding upstream 526673 44667110 ~ 44667324 (+)
G893876 NA non-coding downstream 103624 45384517 ~ 45384723 (+)
G893880 NA non-coding downstream 106229 45387122 ~ 45387370 (+)
G893881 NA non-coding downstream 106548 45387441 ~ 45387735 (+)
G893991 NA non-coding downstream 318889 45599782 ~ 45599984 (+)
G892499 LOC106603104 other upstream 183148 45008834 ~ 45010849 (+)
G892191 NA other upstream 534506 44655558 ~ 44659491 (+)
LOC110533983 LOC106603147 other upstream 1112587 44077660 ~ 44081410 (+)
G891951 LOC106603153 other upstream 1253440 43938412 ~ 43940557 (+)
G891856 NA other upstream 1450507 43742917 ~ 43743490 (+)
LOC110534033 LOC106603099 other downstream 273344 45553481 ~ 45592329 (+)
LOC110534042 LOC106603097 other downstream 341364 45622164 ~ 45654911 (+)
LOC110534056 LOC106603182 other downstream 620152 45898515 ~ 45901940 (+)
G894204 LOC100136012 other downstream 835392 46116285 ~ 46117943 (+)
G894437 LOC106603023 other downstream 1346399 46627292 ~ 46700540 (+)

Expression


Co-expression Network