G893822


Basic Information

Item Value
gene id G893822
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 45262143 ~ 45263484 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1016817
cagtggtgtagtaggtGATTAGTGGTGATACAGTGGTGTAGTTTGTTGACTAGTGATATTAAAGTGGTGTAGTAGGTGACTAACTGTGTTACAGTGGTGCAGAAGGTGACAagtggtgttatagtggtgtagtaCGTGACtagtggtgttacagtggtgCAATAAGTGACTAGTGGTGTTAGAGTGGTGTAGTAGGTCACTACTGGTGTTATAGTTGGGTAAAAAGTGACAagtggtgttacagtggtgtagtaggtGACTACGGGTATAGCAGGTTACtagtggtgttacagtggtgtagtaggttactagtggtgttacagtggtgtagtaggttactagtggtgtaacagtagtgaAAAAGGTGACTAGTGGTGTTACAGTTGTGTAGTAGGTTACTAGTGGTTATACAGTGATGTACTAGGTTACTAGTGAtgttacagtggtgtagtaggttactagtggtgttacagtggtgtagtaggttaatactggtgttacagtggtgtagCAGGAGACAAGTGATGATACAGTGGTATAGTAGATTACTTGTGGTTATACAGTGATGTACTAGGTTACTAGCGGCATTACAGTGGTAAAGTAGGTTACTAGTGTTGTTACTGTGGTGTAGTAGGTTAATAGTGATGATACAGTGGTGAAAAAGGTGACTAGTGGTGTTACAGTTGTGTAGTAGGTTACTCGTGGTTATACAGTGATGTACTAGGTTACTAGTGAtgttacagtggtgtagtaggttactagtgatgttacagtggtgtagtaggtGAGGTGACTAGTGGCGTTACAGTGGTGAAGTAGGTCACAACTGGTTTTACAAAGGTGTAGTAGGTGACTAGTGAATttacagtggtgtagtaggttactaGTGATGCTACAGTGGTGCAGTAGGTTACTAGTGGTGATGTAGATGACTAGTGTtgttacagtggtgtagtaggtGACTAGTGGTGTTACAGTGGTTTAGTAGGTGACtagtggtgttacagtggtgtagtaggtGACTAATGGTGTTACCGTGGTGTAATAGGTGACTAGTGGTCTTAGTGTTGTAGTAGGTTACTATAGGTGTTGTAGATTACTATTGTtgttacagtggtgtagtaggttactagtggtgttacagtggtgtagtaggttactagtggtgttacagtggtgCAATAGGTGACTAATGGTGTTACCGTGGTGTAATAGGTGACTAGTGGTCTTAGCATTGTAGTCAGTTACTATT

Function

NR:

description
PREDICTED: keratin-associated protein 5-5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1016817 True 1252 lncRNA 0.42 2 45262143 45263484

Neighbor

gene id symbol gene type direction distance location
LOC110534028 LOC106603112 coding downstream 80980 45165618 ~ 45181163 (-)
LOC110534025 LOC106603111 coding downstream 244697 45011329 ~ 45017446 (-)
LOC110534024 LOC106603104 coding downstream 251196 45003241 ~ 45010947 (-)
LOC110533119 LOC106603113 coding downstream 283887 44878607 ~ 44978256 (-)
LOC110534031 LOC106603108 coding upstream 63827 45327311 ~ 45381903 (-)
LOC110534045 psmb6 coding upstream 352390 45615874 ~ 45629020 (-)
pold3 pold3 coding upstream 421771 45685255 ~ 45697214 (-)
LOC110534047 NA coding upstream 436805 45700289 ~ 45702447 (-)
wdr73 LOC106603095 coding upstream 444673 45708157 ~ 45710654 (-)
G893508 NA non-coding downstream 302631 44954180 ~ 44959512 (-)
G893497 NA non-coding downstream 545589 44716298 ~ 44716554 (-)
LOC110534017 LOC106603118 non-coding downstream 604341 44655544 ~ 44751420 (-)
G893477 NA non-coding downstream 607109 44654813 ~ 44655034 (-)
G893357 NA non-coding downstream 623017 44637774 ~ 44639126 (-)
G893781 NA non-coding upstream 10990 45274474 ~ 45278522 (-)
G893834 NA non-coding upstream 24668 45288152 ~ 45288513 (-)
G893809 NA non-coding upstream 60482 45323966 ~ 45326807 (-)
G893882 NA non-coding upstream 124323 45387807 ~ 45388036 (-)
G893885 NA non-coding upstream 125560 45389044 ~ 45389258 (-)
G893541 NA other downstream 493071 44768450 ~ 44769072 (-)
LOC110534000 frmd8 other downstream 953210 44303605 ~ 44308978 (-)
LOC110533117 stx5 other downstream 1052879 44199178 ~ 44209264 (-)
G892965 NA other downstream 1551174 43710485 ~ 43710969 (-)
LOC110534046 LOC107567170 other upstream 483831 45747090 ~ 45751405 (-)
G894917 NA other upstream 653795 45917279 ~ 45918339 (-)
LOC110534118 LOC106603020 other upstream 1967320 47203241 ~ 47234608 (-)
G896841 NA other upstream 2724277 47987761 ~ 47989076 (-)
LOC110534172 LOC106602940 other upstream 3618243 48881449 ~ 48907973 (-)

Expression


Co-expression Network