G893881


Basic Information

Item Value
gene id G893881
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 45387441 ~ 45387735 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1016883
gttagaaccagtaaaggccgttTTACCACTCtcgggtagcagaatgactttggcttccctccaggcctgaggacaaagactttcctctaggctcagattcaagatagagtcagctaccatcctcagtagctttccatctaagttgtcaatgccaggaggtttgtcattattgattgataacaaaactttttccacctctcccacactaactttagaaaattcaaacttgcaattatttttttaaatgcaggaACACGATGGTTCACTGTtaattgttggcatttcctgcctaagt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1016883 True 295 lncRNA 0.41 1 45387441 45387735

Neighbor

gene id symbol gene type direction distance location
LOC118937071 NA coding upstream 25155 45362233 ~ 45362286 (+)
LOC110534030 LOC106603107 coding upstream 61567 45290557 ~ 45326891 (+)
LOC110534029 LOC106603110 coding upstream 110471 45200684 ~ 45276970 (+)
LOC110534924 NA coding upstream 231777 45154412 ~ 45155664 (+)
LOC100135968 LOC100135968 coding upstream 237756 45125552 ~ 45149685 (+)
LOC118936925 LOC106603184 coding downstream 50456 45438191 ~ 45443347 (+)
LOC110534037 LOC106603102 coding downstream 57343 45445078 ~ 45450123 (+)
LOC110534036 LOC106563427 coding downstream 71925 45459660 ~ 45549430 (+)
LOC110534033 LOC106603099 coding downstream 165746 45553481 ~ 45592329 (+)
LOC110534042 LOC106603097 coding downstream 234429 45622164 ~ 45654911 (+)
G893880 NA non-coding upstream 71 45387122 ~ 45387370 (+)
G893876 NA non-coding upstream 2718 45384517 ~ 45384723 (+)
G892607 NA non-coding upstream 106548 45193997 ~ 45280893 (+)
G893991 NA non-coding downstream 212047 45599782 ~ 45599984 (+)
G893999 NA non-coding downstream 220247 45607982 ~ 45608316 (+)
G894002 NA non-coding downstream 224846 45612581 ~ 45612904 (+)
G894005 LOC106603098 non-coding downstream 229528 45617263 ~ 45618561 (+)
G894006 NA non-coding downstream 230887 45618622 ~ 45618937 (+)
G892499 LOC106603104 other upstream 376592 45008834 ~ 45010849 (+)
G892191 NA other upstream 727950 44655558 ~ 44659491 (+)
LOC110533983 LOC106603147 other upstream 1306031 44077660 ~ 44081410 (+)
G891951 LOC106603153 other upstream 1446884 43938412 ~ 43940557 (+)
G891856 NA other upstream 1643951 43742917 ~ 43743490 (+)
LOC110534056 LOC106603182 other downstream 513310 45898515 ~ 45901940 (+)
G894204 LOC100136012 other downstream 728550 46116285 ~ 46117943 (+)
G894437 LOC106603023 other downstream 1239557 46627292 ~ 46700540 (+)

Expression


Co-expression Network