G894028


Basic Information

Item Value
gene id G894028
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 45676602 ~ 45676897 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1017051
ccttctccattatacacccttctccattatacacccttctccattataaaccttctccattatacacccttctccattataaaccttctccattataaaccttctcccttataaaccttctccattataaaccttctccattataaaccttctccattatacacccttctccattataaacctccattatacacccttctccattatacacccttctccattataaaccttctccattatacacccttctccattataaaccttctccattataaaccttctccattataaacctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1017051 True 296 lncRNA 0.36 1 45676602 45676897

Neighbor

gene id symbol gene type direction distance location
LOC110534038 chrdl2 coding upstream 2765 45666364 ~ 45673837 (+)
LOC110534042 LOC106603097 coding upstream 21691 45622164 ~ 45654911 (+)
LOC110534033 LOC106603099 coding upstream 84273 45553481 ~ 45592329 (+)
LOC110534036 LOC106563427 coding upstream 127172 45459660 ~ 45549430 (+)
LOC110534037 LOC106603102 coding upstream 226479 45445078 ~ 45450123 (+)
LOC118966785 NA coding downstream 25348 45702245 ~ 45703069 (+)
LOC110534041 LOC106603094 coding downstream 28476 45705373 ~ 45708059 (+)
LOC118936928 NA coding downstream 39476 45716373 ~ 45716966 (+)
LOC110534032 LOC106603093 coding downstream 47920 45724817 ~ 45740843 (+)
LOC110534034 LOC106603091 coding downstream 82803 45759700 ~ 45770162 (+)
G894021 NA non-coding upstream 18554 45657818 ~ 45658048 (+)
G894007 NA non-coding upstream 56472 45619903 ~ 45620130 (+)
G894006 NA non-coding upstream 57665 45618622 ~ 45618937 (+)
G894005 LOC106603098 non-coding upstream 58041 45617263 ~ 45618561 (+)
G894037 NA non-coding downstream 12841 45689738 ~ 45747021 (+)
G894068 NA non-coding downstream 107772 45784669 ~ 45785365 (+)
G894067 NA non-coding downstream 108626 45785523 ~ 45785778 (+)
G894070 LOC106603090 non-coding downstream 111277 45788174 ~ 45788596 (+)
G894071 NA non-coding downstream 111799 45788696 ~ 45788998 (+)
G892499 LOC106603104 other upstream 665753 45008834 ~ 45010849 (+)
G892191 NA other upstream 1017111 44655558 ~ 44659491 (+)
LOC110533983 LOC106603147 other upstream 1595192 44077660 ~ 44081410 (+)
LOC110534056 LOC106603182 other downstream 224148 45898515 ~ 45901940 (+)
G894204 LOC100136012 other downstream 439388 46116285 ~ 46117943 (+)
G894437 LOC106603023 other downstream 950395 46627292 ~ 46700540 (+)
G895515 NA other downstream 1363617 47040514 ~ 47042783 (+)
LOC110511048 LOC106603033 other downstream 1465147 47132135 ~ 47151549 (+)

Expression


Co-expression Network