G894067


Basic Information

Item Value
gene id G894067
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 45785523 ~ 45785778 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1017128
tgcaaacttttgactggtactgcatatactTATTGAAGGCTCACCCCACATGTTCTGACATGGCCAATTAAGGACAGGAGCAATTACTGAGGTATTCAGTTACTTGCCTGCTTCATGTGGAAAGTAATAAACAGTGAAGTCTGCCTTGCCAACACATCTGACAACGGTCTGATGTCTAAAAAAGTATGTCAATTAAATGCACAAACATTGTTTCATTAAAACCTGGTATTGGGGTGGGACACTGTTGGGTCGTGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1017128 True 256 lncRNA 0.41 1 45785523 45785778

Neighbor

gene id symbol gene type direction distance location
LOC110534050 snaa coding upstream 2935 45778283 ~ 45782588 (+)
LOC110534034 LOC106603091 coding upstream 15361 45759700 ~ 45770162 (+)
LOC110534032 LOC106603093 coding upstream 44680 45724817 ~ 45740843 (+)
LOC118936928 NA coding upstream 68557 45716373 ~ 45716966 (+)
LOC110534041 LOC106603094 coding upstream 77464 45705373 ~ 45708059 (+)
LOC110534052 LOC106603088 coding downstream 6430 45792208 ~ 45800378 (+)
LOC110534054 LOC106603087 coding downstream 20907 45806685 ~ 45813020 (+)
LOC110533121 ryr1 coding downstream 27396 45813174 ~ 45885942 (+)
LOC110534056 LOC106603182 coding downstream 112737 45898515 ~ 45901940 (+)
LOC110534057 LOC100136559 coding downstream 118120 45903898 ~ 45910889 (+)
G894068 NA non-coding upstream 158 45784669 ~ 45785365 (+)
G894037 NA non-coding upstream 38502 45689738 ~ 45747021 (+)
G894028 NA non-coding upstream 108626 45676602 ~ 45676897 (+)
G894021 NA non-coding upstream 127475 45657818 ~ 45658048 (+)
LOC110534042 LOC106603097 non-coding upstream 130620 45622164 ~ 45654911 (+)
G894070 LOC106603090 non-coding downstream 2396 45788174 ~ 45788596 (+)
G894071 NA non-coding downstream 2918 45788696 ~ 45788998 (+)
G894072 NA non-coding downstream 3664 45789442 ~ 45789736 (+)
G894074 NA non-coding downstream 15146 45800924 ~ 45804121 (+)
LOC110534033 LOC106603099 other upstream 193214 45553481 ~ 45592329 (+)
G892499 LOC106603104 other upstream 774674 45008834 ~ 45010849 (+)
G892191 NA other upstream 1126032 44655558 ~ 44659491 (+)
LOC110533983 LOC106603147 other upstream 1704113 44077660 ~ 44081410 (+)
G894204 LOC100136012 other downstream 330507 46116285 ~ 46117943 (+)
G894437 LOC106603023 other downstream 841514 46627292 ~ 46700540 (+)
G895515 NA other downstream 1254736 47040514 ~ 47042783 (+)
LOC110511048 LOC106603033 other downstream 1356266 47132135 ~ 47151549 (+)

Expression


Co-expression Network