Gene
RNA
| Item | Value |
|---|---|
| gene id | G894070 |
| gene name | LOC106603090 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 45788174 ~ 45788596 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| radial spoke head protein 6 homolog A-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1017131 | True | 423 | lncRNA | 0.54 | 1 | 45788174 | 45788596 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110534050 | snaa | coding | upstream | 5586 | 45778283 ~ 45782588 (+) |
| LOC110534034 | LOC106603091 | coding | upstream | 18012 | 45759700 ~ 45770162 (+) |
| LOC110534032 | LOC106603093 | coding | upstream | 47331 | 45724817 ~ 45740843 (+) |
| LOC118936928 | NA | coding | upstream | 71208 | 45716373 ~ 45716966 (+) |
| LOC110534041 | LOC106603094 | coding | upstream | 80115 | 45705373 ~ 45708059 (+) |
| LOC110534052 | LOC106603088 | coding | downstream | 3612 | 45792208 ~ 45800378 (+) |
| LOC110534054 | LOC106603087 | coding | downstream | 18089 | 45806685 ~ 45813020 (+) |
| LOC110533121 | ryr1 | coding | downstream | 24578 | 45813174 ~ 45885942 (+) |
| LOC110534056 | LOC106603182 | coding | downstream | 109919 | 45898515 ~ 45901940 (+) |
| LOC110534057 | LOC100136559 | coding | downstream | 115302 | 45903898 ~ 45910889 (+) |
| G894067 | NA | non-coding | upstream | 2396 | 45785523 ~ 45785778 (+) |
| G894068 | NA | non-coding | upstream | 2809 | 45784669 ~ 45785365 (+) |
| G894037 | NA | non-coding | upstream | 41153 | 45689738 ~ 45747021 (+) |
| G894028 | NA | non-coding | upstream | 111277 | 45676602 ~ 45676897 (+) |
| G894021 | NA | non-coding | upstream | 130126 | 45657818 ~ 45658048 (+) |
| G894071 | NA | non-coding | downstream | 100 | 45788696 ~ 45788998 (+) |
| G894072 | NA | non-coding | downstream | 846 | 45789442 ~ 45789736 (+) |
| G894074 | NA | non-coding | downstream | 12328 | 45800924 ~ 45804121 (+) |
| G894084 | NA | non-coding | downstream | 84104 | 45872700 ~ 45872787 (+) |
| LOC110534042 | LOC106603097 | other | upstream | 144618 | 45622164 ~ 45654911 (+) |
| LOC110534033 | LOC106603099 | other | upstream | 195865 | 45553481 ~ 45592329 (+) |
| G892499 | LOC106603104 | other | upstream | 777325 | 45008834 ~ 45010849 (+) |
| G892191 | NA | other | upstream | 1128683 | 44655558 ~ 44659491 (+) |
| LOC110533983 | LOC106603147 | other | upstream | 1706764 | 44077660 ~ 44081410 (+) |
| G894204 | LOC100136012 | other | downstream | 327689 | 46116285 ~ 46117943 (+) |
| G894437 | LOC106603023 | other | downstream | 838696 | 46627292 ~ 46700540 (+) |
| G895515 | NA | other | downstream | 1251918 | 47040514 ~ 47042783 (+) |
| LOC110511048 | LOC106603033 | other | downstream | 1353448 | 47132135 ~ 47151549 (+) |
