Gene
RNA
| Item | Value |
|---|---|
| gene id | G894841 |
| gene name | LOC106603088 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 45793811 ~ 45794541 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1018075 | True | 265 | lncRNA | 0.52 | 2 | 45793811 | 45794541 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110534051 | LOC106603090 | coding | downstream | 3997 | 45785901 ~ 45789814 (-) |
| LOC110534049 | LOC106603092 | coding | downstream | 15705 | 45773830 ~ 45778106 (-) |
| LOC110534046 | LOC107567170 | coding | downstream | 42406 | 45747090 ~ 45751405 (-) |
| LOC110534044 | tm45b | coding | downstream | 47224 | 45741820 ~ 45746587 (-) |
| defbl2 | NA | coding | downstream | 78432 | 45713613 ~ 45715664 (-) |
| LOC110534055 | LOC106603086 | coding | upstream | 91360 | 45885901 ~ 45894223 (-) |
| gabrr3a | LOC106603079 | coding | upstream | 193159 | 45987700 ~ 46010156 (-) |
| LOC110534067 | LOC106603074 | coding | upstream | 367638 | 46162179 ~ 46166379 (-) |
| LOC110534069 | LOC106603073 | coding | upstream | 406999 | 46201540 ~ 46206203 (-) |
| LOC110534925 | NA | coding | upstream | 432309 | 46226850 ~ 46229655 (-) |
| G894832 | LOC106603091 | non-coding | downstream | 28965 | 45764545 ~ 45764846 (-) |
| G894761 | NA | non-coding | downstream | 108699 | 45684861 ~ 45685112 (-) |
| G894783 | NA | non-coding | downstream | 128771 | 45664840 ~ 45665040 (-) |
| G894781 | NA | non-coding | downstream | 130418 | 45663116 ~ 45663393 (-) |
| G894844 | NA | non-coding | upstream | 9819 | 45804360 ~ 45804652 (-) |
| G894864 | NA | non-coding | upstream | 33457 | 45827998 ~ 45828752 (-) |
| G894895 | NA | non-coding | upstream | 83730 | 45878271 ~ 45878761 (-) |
| G894906 | NA | non-coding | upstream | 104925 | 45899466 ~ 45899720 (-) |
| G894907 | LOC106603182 | non-coding | upstream | 105475 | 45900016 ~ 45901935 (-) |
| LOC110534025 | LOC106603111 | other | downstream | 777764 | 45011329 ~ 45017446 (-) |
| G893541 | NA | other | downstream | 1024739 | 44768450 ~ 44769072 (-) |
| LOC110534000 | frmd8 | other | downstream | 1484878 | 44303605 ~ 44308978 (-) |
| LOC110533117 | stx5 | other | downstream | 1584547 | 44199178 ~ 44209264 (-) |
| G894917 | NA | other | upstream | 122738 | 45917279 ~ 45918339 (-) |
| LOC110534118 | LOC106603020 | other | upstream | 1436263 | 47203241 ~ 47234608 (-) |
| G896841 | NA | other | upstream | 2193220 | 47987761 ~ 47989076 (-) |
| LOC110534172 | LOC106602940 | other | upstream | 3087186 | 48881449 ~ 48907973 (-) |
| G899409 | NA | other | upstream | 4361651 | 50156192 ~ 50156902 (-) |
