G894084


Basic Information

Item Value
gene id G894084
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 45872700 ~ 45872787 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1017164
CATTGCTTTATTTGGTTAACGCAAAGTGCTTTATAAAATGACATTACTAACCTACCTGCTGTATATTGGATTCTCATTCCAGACTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1017164 True 88 lncRNA 0.33 1 45872700 45872787

Neighbor

gene id symbol gene type direction distance location
LOC110534054 LOC106603087 coding upstream 59680 45806685 ~ 45813020 (+)
LOC110534052 LOC106603088 coding upstream 72322 45792208 ~ 45800378 (+)
LOC110534050 snaa coding upstream 90112 45778283 ~ 45782588 (+)
LOC110534034 LOC106603091 coding upstream 102538 45759700 ~ 45770162 (+)
LOC110534032 LOC106603093 coding upstream 131857 45724817 ~ 45740843 (+)
LOC110534056 LOC106603182 coding downstream 25728 45898515 ~ 45901940 (+)
LOC110534057 LOC100136559 coding downstream 31111 45903898 ~ 45910889 (+)
LOC110534059 LOC106603082 coding downstream 55268 45928055 ~ 45948321 (+)
LOC110533122 LOC106603081 coding downstream 86705 45959492 ~ 45973263 (+)
LOC118966786 LOC106603081 coding downstream 100579 45973366 ~ 45974174 (+)
G894074 NA non-coding upstream 68579 45800924 ~ 45804121 (+)
G894072 NA non-coding upstream 82964 45789442 ~ 45789736 (+)
G894071 NA non-coding upstream 83702 45788696 ~ 45788998 (+)
G894070 LOC106603090 non-coding upstream 84104 45788174 ~ 45788596 (+)
G894086 NA non-coding downstream 2423 45875210 ~ 45876191 (+)
G894163 NA non-coding downstream 114960 45987747 ~ 45988262 (+)
G894164 LOC106603079 non-coding downstream 115479 45988266 ~ 45989320 (+)
G894172 NA non-coding downstream 126339 45999126 ~ 45999454 (+)
LOC110534042 LOC106603097 other upstream 229144 45622164 ~ 45654911 (+)
LOC110534033 LOC106603099 other upstream 280391 45553481 ~ 45592329 (+)
G892499 LOC106603104 other upstream 861851 45008834 ~ 45010849 (+)
G892191 NA other upstream 1213209 44655558 ~ 44659491 (+)
LOC110533983 LOC106603147 other upstream 1791290 44077660 ~ 44081410 (+)
G894204 LOC100136012 other downstream 243498 46116285 ~ 46117943 (+)
G894437 LOC106603023 other downstream 754505 46627292 ~ 46700540 (+)
G895515 NA other downstream 1167727 47040514 ~ 47042783 (+)
LOC110511048 LOC106603033 other downstream 1269257 47132135 ~ 47151549 (+)

Expression


Co-expression Network