G894086


Basic Information

Item Value
gene id G894086
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 45875210 ~ 45876191 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1017166
agaatatgcatatccttgcttcagggcctgagctacaggcagatttgggtatgtcattttagatggaaattgaaaaaaggggctaatccttaagaggttttaacaagccacataagttgcatggacttactctgtgtgcaataatagtgtttaacatcatttgtttaatgactacctcgtctctgtaccccacgtatacaattatctataaggtccctcagtcgagcagtgcatttctaacacagattcaaccacaaagaccagggaggttttccaatgccccacaaagaagcagacattaaatatccttttgagcatggtgaagttattatttacactttggatagtgtaatacacccagtcaccacaaaggcttccttccaaactcagttgcccgagaagaaggaaactgctcagggatttcatcatgaggccaatggtgactttaaaatagttacagaattgaatggctgtgataggaggtaACAGGATGAataaacattgtagttattccacaatactaacctaattgacagagtgaaaagaaggtgagcctttacagaacaaaaatattcactcgccatattttcaagcatagtggtagctgcagcatgttatgggtatgcttgcaattgttaaggactggtgagtttttcaggataaaaaataaacagaatggagctaagcacaggcaaaatcctagaggaaaacctggttcagtcttctttccaccagatactgggaaatgaattcacctttcagcaggacaataaccaaaacaaaaggccaaatctacactgcagttacttaccaagaagacagtgaattttcCTGAGTAGCCGAGTTACAGTTTGACTTGATTCTGTTTGAATAattatggcaagacctgaaaatgattgtctagcaatgatcaacaaccaatttgacagagcttgaataatttctTAAAGAAtaattgcacaatccaggtgtggaaagctcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1017166 True 982 lncRNA 0.39 1 45875210 45876191

Neighbor

gene id symbol gene type direction distance location
LOC110534054 LOC106603087 coding upstream 62190 45806685 ~ 45813020 (+)
LOC110534052 LOC106603088 coding upstream 74832 45792208 ~ 45800378 (+)
LOC110534050 snaa coding upstream 92622 45778283 ~ 45782588 (+)
LOC110534034 LOC106603091 coding upstream 105048 45759700 ~ 45770162 (+)
LOC110534032 LOC106603093 coding upstream 134367 45724817 ~ 45740843 (+)
LOC110534056 LOC106603182 coding downstream 22324 45898515 ~ 45901940 (+)
LOC110534057 LOC100136559 coding downstream 27707 45903898 ~ 45910889 (+)
LOC110534059 LOC106603082 coding downstream 51864 45928055 ~ 45948321 (+)
LOC110533122 LOC106603081 coding downstream 83301 45959492 ~ 45973263 (+)
LOC118966786 LOC106603081 coding downstream 97175 45973366 ~ 45974174 (+)
G894084 NA non-coding upstream 2423 45872700 ~ 45872787 (+)
G894074 NA non-coding upstream 71089 45800924 ~ 45804121 (+)
G894072 NA non-coding upstream 85474 45789442 ~ 45789736 (+)
G894071 NA non-coding upstream 86212 45788696 ~ 45788998 (+)
G894163 NA non-coding downstream 111556 45987747 ~ 45988262 (+)
G894164 LOC106603079 non-coding downstream 112075 45988266 ~ 45989320 (+)
G894172 NA non-coding downstream 122935 45999126 ~ 45999454 (+)
LOC110534062 NA non-coding downstream 153954 46030145 ~ 46041649 (+)
LOC110534042 LOC106603097 other upstream 231654 45622164 ~ 45654911 (+)
LOC110534033 LOC106603099 other upstream 282901 45553481 ~ 45592329 (+)
G892499 LOC106603104 other upstream 864361 45008834 ~ 45010849 (+)
G892191 NA other upstream 1215719 44655558 ~ 44659491 (+)
LOC110533983 LOC106603147 other upstream 1793800 44077660 ~ 44081410 (+)
G894204 LOC100136012 other downstream 240094 46116285 ~ 46117943 (+)
G894437 LOC106603023 other downstream 751101 46627292 ~ 46700540 (+)
G895515 NA other downstream 1164323 47040514 ~ 47042783 (+)
LOC110511048 LOC106603033 other downstream 1265853 47132135 ~ 47151549 (+)

Expression


Co-expression Network