G894163


Basic Information

Item Value
gene id G894163
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 45987747 ~ 45988262 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1017290
tttttacttataTTCACTGATTTGACAGACACATGCATGTATACATTCATTTTCATGCACATTTAAATTCATACTACTCACATTAACTAAATGTATAAACCAGTGGACAAAAAACAACTGTCCATTACAGTTGGGGTTGCAAACGGAgagtatattactggaaactttcaaagttgaCCAGTAAACTACCACCATTTTTTTAGTAACTTTTTAAAGGATTAAATGTAATttatcacaagacatctagtggccctttttgggtacttcagattaccACAGGTGTCTGTCATTATCTCTGGCcatctgtgtggccttatcacgtgtaaaacatttaaaatactcAAATAAGATGATTCTAAAATTATACAAatctgtaaaacattatcctaaatataaaccagcAATTTaatgaataccattggtgtttaatatgagagtTTCAGCATCAAATATCCATTAGGTTTTCTTTACAcgcttttattattttattattttactatTTCAATATGTATTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1017290 True 516 lncRNA 0.30 1 45987747 45988262

Neighbor

gene id symbol gene type direction distance location
LOC110533124 LOC106603081 coding upstream 1648 45979756 ~ 45986099 (+)
LOC110533123 LOC106603081 coding upstream 7846 45977359 ~ 45979901 (+)
LOC118966786 LOC106603081 coding upstream 13573 45973366 ~ 45974174 (+)
LOC110533122 LOC106603081 coding upstream 14484 45959492 ~ 45973263 (+)
LOC110534059 LOC106603082 coding upstream 39426 45928055 ~ 45948321 (+)
LOC110534061 LOC106603080 coding downstream 19943 46008205 ~ 46021746 (+)
LOC110533125 NA coding downstream 37783 46026045 ~ 46026891 (+)
LOC110534062 NA coding downstream 42048 46030145 ~ 46041649 (+)
phldb2a LOC106603077 coding downstream 80143 46068405 ~ 46089813 (+)
LOC110534064 LOC106603075 coding downstream 117059 46105321 ~ 46127336 (+)
LOC110534056 LOC106603182 non-coding upstream 87915 45898515 ~ 45901940 (+)
G894086 NA non-coding upstream 111556 45875210 ~ 45876191 (+)
G894084 NA non-coding upstream 114960 45872700 ~ 45872787 (+)
G894074 NA non-coding upstream 183626 45800924 ~ 45804121 (+)
LOC110534052 LOC106603088 non-coding upstream 187373 45792208 ~ 45800378 (+)
G894164 LOC106603079 non-coding downstream 4 45988266 ~ 45989320 (+)
G894172 NA non-coding downstream 10864 45999126 ~ 45999454 (+)
G894197 NA non-coding downstream 115148 46103410 ~ 46104074 (+)
G894198 NA non-coding downstream 116093 46104355 ~ 46104625 (+)
LOC110534042 LOC106603097 other upstream 344191 45622164 ~ 45654911 (+)
LOC110534033 LOC106603099 other upstream 395438 45553481 ~ 45592329 (+)
G892499 LOC106603104 other upstream 976898 45008834 ~ 45010849 (+)
G892191 NA other upstream 1328256 44655558 ~ 44659491 (+)
G894204 LOC100136012 other downstream 128023 46116285 ~ 46117943 (+)
G894437 LOC106603023 other downstream 639030 46627292 ~ 46700540 (+)
G895515 NA other downstream 1052252 47040514 ~ 47042783 (+)
LOC110511048 LOC106603033 other downstream 1153782 47132135 ~ 47151549 (+)
G895652 LOC106603032 other downstream 1214663 47202925 ~ 47204842 (+)

Expression


Co-expression Network