Gene
RNA
| Item | Value |
|---|---|
| gene id | G894212 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 46139178 ~ 46139453 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| putative transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1017360 | True | 276 | lncRNA | 0.43 | 1 | 46139178 | 46139453 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110534064 | LOC106603075 | coding | upstream | 11842 | 46105321 ~ 46127336 (+) |
| phldb2a | LOC106603077 | coding | upstream | 49365 | 46068405 ~ 46089813 (+) |
| LOC110534062 | NA | coding | upstream | 97529 | 46030145 ~ 46041649 (+) |
| LOC110533125 | NA | coding | upstream | 112287 | 46026045 ~ 46026891 (+) |
| LOC110534061 | LOC106603080 | coding | upstream | 117432 | 46008205 ~ 46021746 (+) |
| LOC110534065 | LOC106603181 | coding | downstream | 4237 | 46143690 ~ 46151537 (+) |
| LOC110534066 | pdk3 | coding | downstream | 12227 | 46151680 ~ 46162320 (+) |
| LOC110534070 | ccd82 | coding | downstream | 78919 | 46218372 ~ 46221645 (+) |
| trnac-gca | NA | coding | downstream | 90511 | 46229964 ~ 46230035 (+) |
| lipia | LOC106603069 | coding | downstream | 124141 | 46263594 ~ 46278516 (+) |
| G894133 | NA | non-coding | upstream | 5447 | 46130941 ~ 46133731 (+) |
| G894198 | NA | non-coding | upstream | 34553 | 46104355 ~ 46104625 (+) |
| G894197 | NA | non-coding | upstream | 35104 | 46103410 ~ 46104074 (+) |
| G894172 | NA | non-coding | upstream | 139724 | 45999126 ~ 45999454 (+) |
| G894215 | NA | non-coding | downstream | 8422 | 46147875 ~ 46148129 (+) |
| G894228 | NA | non-coding | downstream | 41011 | 46180464 ~ 46180736 (+) |
| G894248 | NA | non-coding | downstream | 70008 | 46209461 ~ 46209884 (+) |
| G894321 | LOC106603070 | non-coding | downstream | 140169 | 46279622 ~ 46280157 (+) |
| G894289 | NA | non-coding | downstream | 164208 | 46303661 ~ 46304186 (+) |
| G894204 | LOC100136012 | other | upstream | 21235 | 46116285 ~ 46117943 (+) |
| LOC110534056 | LOC106603182 | other | upstream | 237367 | 45898515 ~ 45901940 (+) |
| LOC110534042 | LOC106603097 | other | upstream | 495622 | 45622164 ~ 45654911 (+) |
| LOC110534033 | LOC106603099 | other | upstream | 546869 | 45553481 ~ 45592329 (+) |
| G892499 | LOC106603104 | other | upstream | 1128329 | 45008834 ~ 45010849 (+) |
| G894437 | LOC106603023 | other | downstream | 487839 | 46627292 ~ 46700540 (+) |
| G895515 | NA | other | downstream | 901061 | 47040514 ~ 47042783 (+) |
| LOC110511048 | LOC106603033 | other | downstream | 1002591 | 47132135 ~ 47151549 (+) |
| G895652 | LOC106603032 | other | downstream | 1063472 | 47202925 ~ 47204842 (+) |
| G895658 | LOC106603032 | other | downstream | 1076954 | 47216407 ~ 47217071 (+) |
