Gene
RNA
| Item | Value |
|---|---|
| gene id | G894309 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 46315399 ~ 46315876 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: MAP7 domain-containing protein 2-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1017465 | True | 478 | lncRNA | 0.55 | 1 | 46315399 | 46315876 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lipia | LOC106603069 | coding | upstream | 36883 | 46263594 ~ 46278516 (+) |
| trnac-gca | NA | coding | upstream | 85364 | 46229964 ~ 46230035 (+) |
| LOC110534070 | ccd82 | coding | upstream | 93754 | 46218372 ~ 46221645 (+) |
| LOC110534066 | pdk3 | coding | upstream | 153079 | 46151680 ~ 46162320 (+) |
| LOC110534065 | LOC106603181 | coding | upstream | 163862 | 46143690 ~ 46151537 (+) |
| prdx4 | prdx4 | coding | downstream | 58821 | 46374697 ~ 46382856 (+) |
| sat1a.2 | sat1 | coding | downstream | 77036 | 46392912 ~ 46395196 (+) |
| c10hxorf58 | cssa04hxorf58 | coding | downstream | 88432 | 46404308 ~ 46421729 (+) |
| LOC110534088 | LOC106603060 | coding | downstream | 116888 | 46432764 ~ 46442767 (+) |
| LOC110534091 | LOC106603177 | coding | downstream | 156329 | 46472205 ~ 46479506 (+) |
| G894294 | NA | non-coding | upstream | 1484 | 46306602 ~ 46313915 (+) |
| G894289 | NA | non-coding | upstream | 11213 | 46303661 ~ 46304186 (+) |
| G894321 | LOC106603070 | non-coding | upstream | 35242 | 46279622 ~ 46280157 (+) |
| G894248 | NA | non-coding | upstream | 105515 | 46209461 ~ 46209884 (+) |
| G894228 | NA | non-coding | upstream | 134663 | 46180464 ~ 46180736 (+) |
| G894300 | NA | non-coding | downstream | 5303 | 46321179 ~ 46323120 (+) |
| G894306 | NA | non-coding | downstream | 27618 | 46343494 ~ 46346343 (+) |
| G894344 | NA | non-coding | downstream | 69930 | 46385806 ~ 46386052 (+) |
| G894354 | NA | non-coding | downstream | 95513 | 46411389 ~ 46459712 (+) |
| G894303 | NA | non-coding | downstream | 131431 | 46447307 ~ 46464950 (+) |
| G894204 | LOC100136012 | other | upstream | 197456 | 46116285 ~ 46117943 (+) |
| LOC110534056 | LOC106603182 | other | upstream | 413588 | 45898515 ~ 45901940 (+) |
| LOC110534042 | LOC106603097 | other | upstream | 671843 | 45622164 ~ 45654911 (+) |
| LOC110534033 | LOC106603099 | other | upstream | 723090 | 45553481 ~ 45592329 (+) |
| G892499 | LOC106603104 | other | upstream | 1304550 | 45008834 ~ 45010849 (+) |
| G894437 | LOC106603023 | other | downstream | 311416 | 46627292 ~ 46700540 (+) |
| G895515 | NA | other | downstream | 724638 | 47040514 ~ 47042783 (+) |
| LOC110511048 | LOC106603033 | other | downstream | 826168 | 47132135 ~ 47151549 (+) |
| G895652 | LOC106603032 | other | downstream | 887049 | 47202925 ~ 47204842 (+) |
| G895658 | LOC106603032 | other | downstream | 900531 | 47216407 ~ 47217071 (+) |
