G894344


Basic Information

Item Value
gene id G894344
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 46385806 ~ 46386052 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1017507
gacacataaactactgcagcataaatactggaggctgagacaggaggggtcaggagacactatggccccatccgaggacacccccagacagggccaaacaggaaggatataaccccacccactttgccaaagcacagcccccacaccactagagggatatcttcaaccaccaacttaccatcctgagacaaggccgagtatagcccacaaagatctccgccacggcacaacccaagggggggcgcca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1017507 True 247 lncRNA 0.56 1 46385806 46386052

Neighbor

gene id symbol gene type direction distance location
prdx4 prdx4 coding upstream 2950 46374697 ~ 46382856 (+)
lipia LOC106603069 coding upstream 107290 46263594 ~ 46278516 (+)
trnac-gca NA coding upstream 155771 46229964 ~ 46230035 (+)
LOC110534070 ccd82 coding upstream 164161 46218372 ~ 46221645 (+)
LOC110534066 pdk3 coding upstream 223486 46151680 ~ 46162320 (+)
sat1a.2 sat1 coding downstream 6860 46392912 ~ 46395196 (+)
c10hxorf58 cssa04hxorf58 coding downstream 18256 46404308 ~ 46421729 (+)
LOC110534088 LOC106603060 coding downstream 46712 46432764 ~ 46442767 (+)
LOC110534091 LOC106603177 coding downstream 86153 46472205 ~ 46479506 (+)
LOC118966790 shisa2 coding downstream 118168 46504220 ~ 46507756 (+)
G894306 NA non-coding upstream 39463 46343494 ~ 46346343 (+)
G894300 NA non-coding upstream 62686 46321179 ~ 46323120 (+)
G894309 NA non-coding upstream 69930 46315399 ~ 46315876 (+)
G894294 NA non-coding upstream 71891 46306602 ~ 46313915 (+)
G894289 NA non-coding upstream 81620 46303661 ~ 46304186 (+)
G894354 NA non-coding downstream 25337 46411389 ~ 46459712 (+)
G894303 NA non-coding downstream 61255 46447307 ~ 46464950 (+)
G894390 NA non-coding downstream 107670 46493722 ~ 46493943 (+)
G894392 NA non-coding downstream 137811 46523863 ~ 46524283 (+)
G894398 NA non-coding downstream 146801 46532853 ~ 46533073 (+)
G894204 LOC100136012 other upstream 267863 46116285 ~ 46117943 (+)
LOC110534056 LOC106603182 other upstream 483995 45898515 ~ 45901940 (+)
LOC110534042 LOC106603097 other upstream 742250 45622164 ~ 45654911 (+)
LOC110534033 LOC106603099 other upstream 793497 45553481 ~ 45592329 (+)
G892499 LOC106603104 other upstream 1374957 45008834 ~ 45010849 (+)
G894437 LOC106603023 other downstream 241240 46627292 ~ 46700540 (+)
G895515 NA other downstream 654462 47040514 ~ 47042783 (+)
LOC110511048 LOC106603033 other downstream 755992 47132135 ~ 47151549 (+)
G895652 LOC106603032 other downstream 816873 47202925 ~ 47204842 (+)
G895658 LOC106603032 other downstream 830355 47216407 ~ 47217071 (+)

Expression


Co-expression Network