G894303


Basic Information

Item Value
gene id G894303
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 46447307 ~ 46464950 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1017459
TCTGGTTTTCATCACAGGTTCCTTTCTGTATTCTTTCTCCTAACGTTTCTTTTTTTCTCCATAATAATCCCTAGTTTGTTCCTCGTCATTTGATTTTCAATGTAACGCTGATTTCTGAtccctctcttcattctctctcttaccccctgTAGATTGAAGTCTCCTTGGGGCATGACCTCAGCGGTGATAACCAAGGAGCAGAGCAGTGCTCCTAGTGCGCTCAGCAGCATGGTCGTCATGGCTACAGCAGAGCAGGATTGAAGTCTCCTTGGGGCATGACCTCAGCGGTGATAACCAAGGAGCAGAGCAGTGCTCCTAGTGCGCTCAGCAGCATGGTCGTCATGGCTACAGCAGAGCAGGGTCAGTATCAAGAATTATAAAGGACAAAACAGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1017459 True 395 lncRNA 0.48 2 46447307 46464950

Neighbor

gene id symbol gene type direction distance location
LOC110534088 LOC106603060 coding upstream 4540 46432764 ~ 46442767 (+)
c10hxorf58 cssa04hxorf58 coding upstream 25578 46404308 ~ 46421729 (+)
sat1a.2 sat1 coding upstream 52111 46392912 ~ 46395196 (+)
prdx4 prdx4 coding upstream 64451 46374697 ~ 46382856 (+)
lipia LOC106603069 coding upstream 168791 46263594 ~ 46278516 (+)
LOC110534091 LOC106603177 coding downstream 7255 46472205 ~ 46479506 (+)
LOC118966790 shisa2 coding downstream 39270 46504220 ~ 46507756 (+)
LOC110534094 wasf3 coding downstream 42946 46507896 ~ 46518086 (+)
gsx1 LOC106603173 coding downstream 101837 46566787 ~ 46568284 (+)
LOC110534098 LOC106603051 coding downstream 119545 46584495 ~ 46595768 (+)
G894344 NA non-coding upstream 61255 46385806 ~ 46386052 (+)
G894306 NA non-coding upstream 100964 46343494 ~ 46346343 (+)
G894300 NA non-coding upstream 124187 46321179 ~ 46323120 (+)
G894309 NA non-coding upstream 131431 46315399 ~ 46315876 (+)
G894294 NA non-coding upstream 133392 46306602 ~ 46313915 (+)
G894390 NA non-coding downstream 28772 46493722 ~ 46493943 (+)
G894392 NA non-coding downstream 58913 46523863 ~ 46524283 (+)
G894398 NA non-coding downstream 67903 46532853 ~ 46533073 (+)
G894399 NA non-coding downstream 68310 46533260 ~ 46533512 (+)
G894400 NA non-coding downstream 68748 46533698 ~ 46533907 (+)
G894204 LOC100136012 other upstream 329364 46116285 ~ 46117943 (+)
LOC110534056 LOC106603182 other upstream 545496 45898515 ~ 45901940 (+)
LOC110534042 LOC106603097 other upstream 803751 45622164 ~ 45654911 (+)
LOC110534033 LOC106603099 other upstream 854998 45553481 ~ 45592329 (+)
G892499 LOC106603104 other upstream 1436458 45008834 ~ 45010849 (+)
G894437 LOC106603023 other downstream 162342 46627292 ~ 46700540 (+)
G895515 NA other downstream 575564 47040514 ~ 47042783 (+)
LOC110511048 LOC106603033 other downstream 677094 47132135 ~ 47151549 (+)
G895652 LOC106603032 other downstream 737975 47202925 ~ 47204842 (+)
G895658 LOC106603032 other downstream 751457 47216407 ~ 47217071 (+)

Expression


Co-expression Network