G895213


Basic Information

Item Value
gene id G895213
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 46523207 ~ 46523757 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1018533
gtgtatactGTGTTAATATAGCTATTTGTCTTCTCCAACCCCCACACTTACGCACACGATGAGATTCCTCGAAGCACGCGGTCACAGGCTTTTAGACACTCATTAGCCCATATTAATACAATAAGTGTCAGCTCTGATTACACAGTGTTGTCGCGGATTTTGGGATTGGGACACCCCCTAACTCTATACATGGGGTGCTACACTCTTCCCACACAGCACTGcttctcacacagacacaatataTGGATTTTCTCTCACTGTTGCCTTTGTCTCACACTGACATACGCACACTGACAtttacactcacatacacactctctctctctctctctgtctgttttgctctctctctccctcaactccACAAGCAAGAATCACAGACTGCATACATTCACAGACTGCAATTTGAACACAACCCCCCAAGGTTCCATCATGACATGGACATGCAGAGACATAGACATGACATAGACATGCAGAGACATGCAGAGGACCATCAGCGGTTGGTTCGGGACAGGCAGCTGTTTAAGGAACCTCCCTACCCCACTCTGCGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1018533 True 551 lncRNA 0.47 1 46523207 46523757

Neighbor

gene id symbol gene type direction distance location
LOC110534093 LOC106603053 coding downstream 19195 46495803 ~ 46504012 (-)
LOC110534092 LOC106603055 coding downstream 34765 46483298 ~ 46488442 (-)
LOC118966788 NA coding downstream 52631 46455259 ~ 46470576 (-)
LOC118966787 NA coding downstream 58262 46463023 ~ 46464945 (-)
LOC118966789 NA coding downstream 69049 46453335 ~ 46454158 (-)
mtif3 mtif3 coding upstream 20308 46544065 ~ 46550149 (-)
LOC110534101 LOC106603048 coding upstream 98319 46622076 ~ 46633291 (-)
LOC118966791 NA coding upstream 116907 46640664 ~ 46642200 (-)
LOC110534100 LOC106603048 coding upstream 123376 46647133 ~ 46661803 (-)
LOC110534103 NA coding upstream 161840 46685597 ~ 46690276 (-)
G895212 NA non-coding downstream 449 46522507 ~ 46522758 (-)
G895211 NA non-coding downstream 1891 46520858 ~ 46521316 (-)
G895210 NA non-coding downstream 4110 46518789 ~ 46519097 (-)
G895208 NA non-coding downstream 7387 46514873 ~ 46515820 (-)
G895205 wasf3 non-coding downstream 9455 46509638 ~ 46513752 (-)
G895216 NA non-coding upstream 6891 46530648 ~ 46531000 (-)
G895222 NA non-coding upstream 14263 46538020 ~ 46538239 (-)
G895225 NA non-coding upstream 15661 46539418 ~ 46539752 (-)
G895250 NA non-coding upstream 51370 46575127 ~ 46575853 (-)
G895263 LOC106603051 non-coding upstream 70349 46594106 ~ 46595670 (-)
G894917 NA other downstream 604868 45917279 ~ 45918339 (-)
LOC110534046 LOC107567170 other downstream 772876 45747090 ~ 45751405 (-)
LOC110534025 LOC106603111 other downstream 1507160 45011329 ~ 45017446 (-)
G893541 NA other downstream 1754135 44768450 ~ 44769072 (-)
LOC110534000 frmd8 other downstream 2214274 44303605 ~ 44308978 (-)
LOC110534118 LOC106603020 other upstream 707047 47203241 ~ 47234608 (-)
G896841 NA other upstream 1464004 47987761 ~ 47989076 (-)
LOC110534172 LOC106602940 other upstream 2357970 48881449 ~ 48907973 (-)
G899409 NA other upstream 3632435 50156192 ~ 50156902 (-)
G899421 NA other upstream 3658639 50182396 ~ 50182788 (-)

Expression


Co-expression Network