G895250


Basic Information

Item Value
gene id G895250
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 46575127 ~ 46575853 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1018572
agaaaaaaaatccagaaaatcacattgtaggattttttatgaatttatttgcaaattatggtggaaaataagtatttggtcaataacaaaagtttatctcaatattttgttatataccctttgttggcaatgacagaggtcaaacgttttctgtaagtcttcacaaggttttcacaaactgttgctggtattttggcccattcctccatgcagatctcctctagagcagtgatgttttggggctgttgctgggcaacatggactttcaactctctccaaagattttctatggggttgagatctggagactggctaggccactccaggaccttgaaatgcttcttacgaagccactccttcgttgcccgggcggtgtgtttgggatcattgtcatgctgaaagacccagccatgtttcatcttcaatgcccttgctgatggaaggaggttttcactcaaaatctcacgatacatggccccattcattctttcctttacacggatcagtcgtcctggtccctttgcagaaaaacagccccaaagcatgatgtttccaccttcatgtttcacagtaggtatggtgttctttggatgcaactcagcattctttgtcctccaaacacaacgagttgagtttttaccaaaaagttatattttggtttcatctgaccatatgacattctcccaatcttcttctggatcatccaaatgctctctagcaaacttta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1018572 True 727 lncRNA 0.41 1 46575127 46575853

Neighbor

gene id symbol gene type direction distance location
mtif3 mtif3 coding downstream 24978 46544065 ~ 46550149 (-)
LOC110534093 LOC106603053 coding downstream 71115 46495803 ~ 46504012 (-)
LOC110534092 LOC106603055 coding downstream 86685 46483298 ~ 46488442 (-)
LOC118966788 NA coding downstream 104551 46455259 ~ 46470576 (-)
LOC118966787 NA coding downstream 110182 46463023 ~ 46464945 (-)
LOC110534101 LOC106603048 coding upstream 46223 46622076 ~ 46633291 (-)
LOC118966791 NA coding upstream 64811 46640664 ~ 46642200 (-)
LOC110534100 LOC106603048 coding upstream 71280 46647133 ~ 46661803 (-)
LOC110534103 NA coding upstream 109744 46685597 ~ 46690276 (-)
LOC110534102 LOC106603049 coding upstream 117153 46693006 ~ 46706498 (-)
G895225 NA non-coding downstream 35375 46539418 ~ 46539752 (-)
G895222 NA non-coding downstream 36888 46538020 ~ 46538239 (-)
G895216 NA non-coding downstream 44127 46530648 ~ 46531000 (-)
G895213 NA non-coding downstream 51370 46523207 ~ 46523757 (-)
G895212 NA non-coding downstream 52369 46522507 ~ 46522758 (-)
G895263 LOC106603051 non-coding upstream 18253 46594106 ~ 46595670 (-)
G895267 NA non-coding upstream 25283 46601136 ~ 46601343 (-)
G895269 NA non-coding upstream 27489 46603342 ~ 46603763 (-)
G895224 LOC106603050 non-coding upstream 35177 46611030 ~ 46615687 (-)
G895282 NA non-coding upstream 57450 46633303 ~ 46638272 (-)
G894917 NA other downstream 656788 45917279 ~ 45918339 (-)
LOC110534046 LOC107567170 other downstream 824796 45747090 ~ 45751405 (-)
LOC110534025 LOC106603111 other downstream 1559080 45011329 ~ 45017446 (-)
G893541 NA other downstream 1806055 44768450 ~ 44769072 (-)
LOC110534000 frmd8 other downstream 2266194 44303605 ~ 44308978 (-)
LOC110534118 LOC106603020 other upstream 654951 47203241 ~ 47234608 (-)
G896841 NA other upstream 1411908 47987761 ~ 47989076 (-)
LOC110534172 LOC106602940 other upstream 2305874 48881449 ~ 48907973 (-)
G899409 NA other upstream 3580339 50156192 ~ 50156902 (-)
G899421 NA other upstream 3606543 50182396 ~ 50182788 (-)

Expression


Co-expression Network