G894457


Basic Information

Item Value
gene id G894457
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 46604263 ~ 46604476 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1017632
cccttgtgagaccatatgctggtgcggttggccctgggttcctcctgggttcctcctaatgcaagacaatgctagacctcatgcggctggagtgtgtcagcagttcctgcaagaggaaggcattgatgctatggactggcccgcccgttccccagacctgaatccaactgagcacatctgggacatcatgtctcgctccatccaccaacgccac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1017632 True 214 lncRNA 0.57 1 46604263 46604476

Neighbor

gene id symbol gene type direction distance location
LOC110534098 LOC106603051 coding upstream 8495 46584495 ~ 46595768 (+)
gsx1 LOC106603173 coding upstream 35979 46566787 ~ 46568284 (+)
LOC110534094 wasf3 coding upstream 86177 46507896 ~ 46518086 (+)
LOC118966790 shisa2 coding upstream 96507 46504220 ~ 46507756 (+)
LOC110534091 LOC106603177 coding upstream 124757 46472205 ~ 46479506 (+)
LOC110534926 NA coding downstream 3980 46608456 ~ 46609639 (+)
LOC110534099 LOC106603050 coding downstream 6579 46611055 ~ 46615697 (+)
LOC110534104 LOC106603047 coding downstream 117289 46721765 ~ 46730727 (+)
LOC110534106 LOC106603046 coding downstream 128400 46732876 ~ 46747726 (+)
LOC110534107 LOC106603045 coding downstream 160572 46765048 ~ 46799754 (+)
G894436 NA non-coding upstream 20380 46583516 ~ 46583883 (+)
G894435 NA non-coding upstream 21619 46582428 ~ 46582644 (+)
G894407 NA non-coding upstream 63508 46540545 ~ 46540755 (+)
G894404 NA non-coding upstream 67669 46536392 ~ 46536594 (+)
G894402 NA non-coding upstream 68751 46535296 ~ 46535512 (+)
G894444 NA non-coding downstream 17615 46622091 ~ 46622954 (+)
G894437 LOC106603023 non-coding downstream 22816 46627292 ~ 46700540 (+)
G894468 NA non-coding downstream 28821 46633297 ~ 46638275 (+)
G894440 NA non-coding downstream 88543 46693019 ~ 46695165 (+)
G894204 LOC100136012 other upstream 486320 46116285 ~ 46117943 (+)
LOC110534056 LOC106603182 other upstream 702452 45898515 ~ 45901940 (+)
LOC110534042 LOC106603097 other upstream 960707 45622164 ~ 45654911 (+)
LOC110534033 LOC106603099 other upstream 1011954 45553481 ~ 45592329 (+)
G892499 LOC106603104 other upstream 1593414 45008834 ~ 45010849 (+)
G895515 NA other downstream 436038 47040514 ~ 47042783 (+)
LOC110511048 LOC106603033 other downstream 537568 47132135 ~ 47151549 (+)
G895652 LOC106603032 other downstream 598449 47202925 ~ 47204842 (+)
G895658 LOC106603032 other downstream 611931 47216407 ~ 47217071 (+)

Expression


Co-expression Network