Gene
RNA
| Item | Value |
|---|---|
| gene id | G894444 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 46622091 ~ 46622954 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| matrin-3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1017618 | True | 468 | lncRNA | 0.45 | 3 | 46622091 | 46622954 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110534099 | LOC106603050 | coding | upstream | 6394 | 46611055 ~ 46615697 (+) |
| LOC110534926 | NA | coding | upstream | 12452 | 46608456 ~ 46609639 (+) |
| LOC110534098 | LOC106603051 | coding | upstream | 26323 | 46584495 ~ 46595768 (+) |
| gsx1 | LOC106603173 | coding | upstream | 53807 | 46566787 ~ 46568284 (+) |
| LOC110534094 | wasf3 | coding | upstream | 104005 | 46507896 ~ 46518086 (+) |
| LOC110534104 | LOC106603047 | coding | downstream | 98811 | 46721765 ~ 46730727 (+) |
| LOC110534106 | LOC106603046 | coding | downstream | 109922 | 46732876 ~ 46747726 (+) |
| LOC110534107 | LOC106603045 | coding | downstream | 142094 | 46765048 ~ 46799754 (+) |
| LOC110534109 | NA | coding | downstream | 241093 | 46864047 ~ 46867604 (+) |
| LOC110534110 | LOC106603042 | coding | downstream | 265046 | 46888000 ~ 46894991 (+) |
| G894457 | NA | non-coding | upstream | 17615 | 46604263 ~ 46604476 (+) |
| G894436 | NA | non-coding | upstream | 38208 | 46583516 ~ 46583883 (+) |
| G894435 | NA | non-coding | upstream | 39447 | 46582428 ~ 46582644 (+) |
| G894407 | NA | non-coding | upstream | 81336 | 46540545 ~ 46540755 (+) |
| G894404 | NA | non-coding | upstream | 85497 | 46536392 ~ 46536594 (+) |
| G894437 | LOC106603023 | non-coding | downstream | 4338 | 46627292 ~ 46700540 (+) |
| G894468 | NA | non-coding | downstream | 10343 | 46633297 ~ 46638275 (+) |
| G894440 | NA | non-coding | downstream | 70065 | 46693019 ~ 46695165 (+) |
| G894512 | NA | non-coding | downstream | 176947 | 46799901 ~ 46841538 (+) |
| G894204 | LOC100136012 | other | upstream | 504148 | 46116285 ~ 46117943 (+) |
| LOC110534056 | LOC106603182 | other | upstream | 720280 | 45898515 ~ 45901940 (+) |
| LOC110534042 | LOC106603097 | other | upstream | 978535 | 45622164 ~ 45654911 (+) |
| LOC110534033 | LOC106603099 | other | upstream | 1029782 | 45553481 ~ 45592329 (+) |
| G892499 | LOC106603104 | other | upstream | 1611242 | 45008834 ~ 45010849 (+) |
| G895515 | NA | other | downstream | 417560 | 47040514 ~ 47042783 (+) |
| LOC110511048 | LOC106603033 | other | downstream | 519090 | 47132135 ~ 47151549 (+) |
| G895652 | LOC106603032 | other | downstream | 579971 | 47202925 ~ 47204842 (+) |
| G895658 | LOC106603032 | other | downstream | 593453 | 47216407 ~ 47217071 (+) |
