Gene
RNA
| Item | Value |
|---|---|
| gene id | G894519 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 46896938 ~ 46897829 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1017698 | True | 892 | lncRNA | 0.32 | 1 | 46896938 | 46897829 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110534110 | LOC106603042 | coding | upstream | 1947 | 46888000 ~ 46894991 (+) |
| LOC110534109 | NA | coding | upstream | 29334 | 46864047 ~ 46867604 (+) |
| LOC110534107 | LOC106603045 | coding | upstream | 97184 | 46765048 ~ 46799754 (+) |
| LOC110534106 | LOC106603046 | coding | upstream | 149212 | 46732876 ~ 46747726 (+) |
| LOC110534104 | LOC106603047 | coding | upstream | 166211 | 46721765 ~ 46730727 (+) |
| LOC110534111 | LOC106603040 | coding | downstream | 18307 | 46916136 ~ 46962543 (+) |
| LOC110534113 | LOC106603039 | coding | downstream | 111520 | 47009349 ~ 47016212 (+) |
| LOC110533128 | LOC106603037 | coding | downstream | 133600 | 47031429 ~ 47034505 (+) |
| LOC110534117 | UBE2D2 | coding | downstream | 226040 | 47123869 ~ 47127973 (+) |
| LOC110511048 | LOC106603033 | coding | downstream | 234306 | 47132135 ~ 47151549 (+) |
| G894518 | NA | non-coding | upstream | 119 | 46895870 ~ 46896819 (+) |
| G894561 | NA | non-coding | upstream | 15401 | 46881246 ~ 46881537 (+) |
| G894558 | NA | non-coding | upstream | 22938 | 46873589 ~ 46874000 (+) |
| G894512 | NA | non-coding | upstream | 55400 | 46799901 ~ 46841538 (+) |
| G894569 | NA | non-coding | downstream | 2443 | 46900272 ~ 46938947 (+) |
| G894596 | NA | non-coding | downstream | 53147 | 46950976 ~ 46951466 (+) |
| G895475 | NA | non-coding | downstream | 73624 | 46971453 ~ 46971807 (+) |
| G895487 | NA | non-coding | downstream | 87215 | 46985044 ~ 46985360 (+) |
| G895491 | NA | non-coding | downstream | 92273 | 46990102 ~ 46990544 (+) |
| G894437 | LOC106603023 | other | upstream | 196398 | 46627292 ~ 46700540 (+) |
| G894204 | LOC100136012 | other | upstream | 778995 | 46116285 ~ 46117943 (+) |
| LOC110534056 | LOC106603182 | other | upstream | 995127 | 45898515 ~ 45901940 (+) |
| LOC110534042 | LOC106603097 | other | upstream | 1253382 | 45622164 ~ 45654911 (+) |
| LOC110534033 | LOC106603099 | other | upstream | 1304629 | 45553481 ~ 45592329 (+) |
| G895515 | NA | other | downstream | 142685 | 47040514 ~ 47042783 (+) |
| G895652 | LOC106603032 | other | downstream | 305096 | 47202925 ~ 47204842 (+) |
| G895658 | LOC106603032 | other | downstream | 318578 | 47216407 ~ 47217071 (+) |
| G896043 | NA | other | downstream | 1011887 | 47909716 ~ 47910975 (+) |
