G894569


Basic Information

Item Value
gene id G894569
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 46900272 ~ 46938947 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1017749
cttaaaaaaaggggtcaaaattattggcacccctgttttcaatatctttcaatacctcaccttgcgaggataatgATACTGAGccgttttctaaaatgttttatgagattagagaacacattgggagggatcttagaccattcctccatacagaatctttccagatccttgatgtcctttgtctGTTTTACGGACTGCCTTCTTCTATTC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1017749 True 210 lncRNA 0.39 2 46900272 46938947

Neighbor

gene id symbol gene type direction distance location
LOC110534110 LOC106603042 coding upstream 5281 46888000 ~ 46894991 (+)
LOC110534109 NA coding upstream 32668 46864047 ~ 46867604 (+)
LOC110534107 LOC106603045 coding upstream 100518 46765048 ~ 46799754 (+)
LOC110534106 LOC106603046 coding upstream 152546 46732876 ~ 46747726 (+)
LOC110534104 LOC106603047 coding upstream 169545 46721765 ~ 46730727 (+)
LOC110534113 LOC106603039 coding downstream 70402 47009349 ~ 47016212 (+)
LOC110533128 LOC106603037 coding downstream 92482 47031429 ~ 47034505 (+)
LOC110534117 UBE2D2 coding downstream 184922 47123869 ~ 47127973 (+)
LOC110511048 LOC106603033 coding downstream 193188 47132135 ~ 47151549 (+)
LOC110534120 LOC106563662 coding downstream 320294 47259241 ~ 47374572 (+)
G894519 NA non-coding upstream 2443 46896938 ~ 46897829 (+)
G894518 NA non-coding upstream 3453 46895870 ~ 46896819 (+)
G894561 NA non-coding upstream 18735 46881246 ~ 46881537 (+)
G894558 NA non-coding upstream 26272 46873589 ~ 46874000 (+)
G894512 NA non-coding upstream 58734 46799901 ~ 46841538 (+)
G894596 NA non-coding downstream 12029 46950976 ~ 46951466 (+)
G895475 NA non-coding downstream 32506 46971453 ~ 46971807 (+)
G895487 NA non-coding downstream 46097 46985044 ~ 46985360 (+)
G895491 NA non-coding downstream 51155 46990102 ~ 46990544 (+)
G895492 NA non-coding downstream 52216 46991163 ~ 46991443 (+)
G894437 LOC106603023 other upstream 199732 46627292 ~ 46700540 (+)
G894204 LOC100136012 other upstream 782329 46116285 ~ 46117943 (+)
LOC110534056 LOC106603182 other upstream 998461 45898515 ~ 45901940 (+)
LOC110534042 LOC106603097 other upstream 1256716 45622164 ~ 45654911 (+)
LOC110534033 LOC106603099 other upstream 1307963 45553481 ~ 45592329 (+)
G895515 NA other downstream 101567 47040514 ~ 47042783 (+)
G895652 LOC106603032 other downstream 263978 47202925 ~ 47204842 (+)
G895658 LOC106603032 other downstream 277460 47216407 ~ 47217071 (+)
G896043 NA other downstream 970769 47909716 ~ 47910975 (+)

Expression


Co-expression Network